Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00098 AAAAACATCATGGTTGATCAGGTTCAGCATCCTAGAGTGATGGAGAAGGTTGCAAGTCAGCTACATCTTCGAACTGGCCTTCCACTGTACCACCAGAGGCGATCTTTCCAGAATTACTCCAATGCTGTCTCATCAGGGAAACACTACAATGCAGCATTTCAGTATCCAGTGATGCCACCATGCAGAGGCGTAATTGATGTCTCTGCTGTTGCAGCTTCACCTGTCTTTGTTGCTGCTCCTGCTGAGAAGGGAAACTTCCTCATTGACTTTCTCATGGGTGGAGTTTCTGCTGCTGTCTCCAAAACTGCTGCTGCCCCCATTGAACGCGTCAAGCTCTTGATCCAGAACCAGGATGAGATGATCAAAGCCGGTAGACTCTCTGAGCCCTACAAAGGTATTGGTGACTGTTTTAAGAGGACAATCAATGAAGAGGGTTTTGGTTCCCTTTGGAGAGGTAACACTGCAAATGTCATCCGTTATTTCCCTACTCAGGCACTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAAGGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCTTCCCTTTTCTTTGTCTACTCCCTTGACTACGCTCGTACCCGTCTGGCTAATGATGCCAAGGCTGCAAAGAAGGGTGGAGAAAGGCAATTCAATGGCCTCGTTGATGTCTACAGGAAGACATTAGCTTCTGATGGTGTTGCTGGTCTTTACCGTGGCTTCAACATTTCCTGCGTTGGAATCATTGTGTATCGTGGCCTCTACTTTGGAATGTATGATTCTCTCAAACCAGTTCTCTTAACCGGCTCTTTACAGGATAGCTTTTTCGCTAGCTTTGCTCTTGGATGGTTGATCACGAATGGTGCTGGTTTAGCTTCATACCCAATTGATACTGTGAGAAGAAGGATGATGATGACATCTGGTGAAGCTGTGAAGTACAAGAGCTCCATGCATGCGTTCACACAGATCCTTCAGAATGAGGGTGCAAAGTCATTGTTTAAGGGAGCTGGTGCTAACATTCTTCGTGCTGTTGCCGGTGCTGGTGTGCTGGCTGGTTATGACAAGTTGCAGGTCATAGTCTTTGGCAAGAAGTATGGCTCTGGTGGAGCTTAA 1161 0.4686 KNIMVDQVQHPRVMEKVASQLHLRTGLPLYHQRRSFQNYSNAVSSGKHYNAAFQYPVMPPCRGVIDVSAVAASPVFVAAPAEKGNFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTINEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMHAFTQILQNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00098 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 281 IPR018108 -
Vimu5g00098 386 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 75 385 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu5g00098 386 Pfam Mitochondrial carrier protein 85 181 IPR018108 -
Vimu5g00098 386 Pfam Mitochondrial carrier protein 188 284 IPR018108 -
Vimu5g00098 386 Pfam Mitochondrial carrier protein 290 375 IPR018108 -
Vimu5g00098 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 289 375 IPR018108 -
Vimu5g00098 386 SUPERFAMILY Mitochondrial carrier 84 371 IPR023395 -
Vimu5g00098 386 FunFam ADP,ATP carrier protein, mitochondrial 87 382 - -
Vimu5g00098 386 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu5g00098 386 PRINTS Adenine nucleotide translocator signature 189 202 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu5g00098 386 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu5g00098 386 PRINTS Adenine nucleotide translocator signature 163 175 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu5g00098 386 PRINTS Adenine nucleotide translocator signature 294 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu5g00098 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 177 IPR018108 -
Vimu5g00098 386 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Vimu5g00098 386 PRINTS Mitochondrial carrier protein signature 298 320 IPR002067 GO:0055085
Vimu5g00098 386 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Vimu5g00098 386 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Vimu5g00098 386 PRINTS Mitochondrial carrier protein signature 254 272 IPR002067 GO:0055085
Vimu5g00098 386 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Vimu5g00098 386 Gene3D Mitochondrial carrier domain 87 382 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00098 Vimu-Chr5 756480 757853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00098 4 386 Antiporters AT5G13490 78.571 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00098 K05863 - gmx:100793257 649.818