Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00091 ATGGCTCAGAAGGCGGAGAAAAACGATACCGACTTCAAGGTCCCGGAACCAATCACACCCTGCGCCACCACAACCGCCGCCGCTGCAACTTCGATTTCCGAGCCTTCTAGATTCTTCGACGCCGTCGCTCCGGCCACGTCGTCGCGTTCGCCCAAACGCTCGCTTCCGCAGGAGGACGCTGCGAGCGCGGACCGGACGTCGTCATCGGAGCCGAAGCGCGCGGTGAACAGGTGCTCGGGATGCCGGCGGCGCGTCGGACTGACCGGATTTCGTTGTCGGTGCGGTGACCTCTTCTGCGCTGAGCACCGGTACACCGATCGCCATGACTGCTCCTACGACTACAAGGCAGCCGGGAGAGAGGCCATCGCGAGGGAGAATCCCGTCGTGAAGGCCGCGAAGATCGTGAAGGTCTGA 414 0.6353 MAQKAEKNDTDFKVPEPITPCATTTAAAATSISEPSRFFDAVAPATSSRSPKRSLPQEDAASADRTSSSEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYTDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00091 137 Pfam AN1-like Zinc finger 78 115 IPR000058 GO:0008270
Vimu5g00091 137 Gene3D - 46 133 IPR035896 -
Vimu5g00091 137 SUPERFAMILY AN1-like Zinc finger 64 131 IPR035896 -
Vimu5g00091 137 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Vimu5g00091 137 FunFam Zinc finger AN1-type containing 6 52 133 - -
Vimu5g00091 137 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
Vimu5g00091 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 40 136 - -
Vimu5g00091 137 MobiDBLite consensus disorder prediction 47 74 - -
Vimu5g00091 137 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00091 Vimu-Chr5 691832 692245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00091 50 137 C2H2 Transcription Factor Family AT3G52800 52.273 4.37e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00091 - - gmx:100794830 223.787