Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00085 ATGATTGAGACACTCTTATTCTTCTTCCTGCTTCTGTTCTTCTTCCTCATTGTCAGGTGCACCGGAAAAAGCACCTCCGACCATCTCCACCTTCCACCAAGCCCTCCAAGCCTCCCTCTGCTAGGGCACCTCCATCTCCTCTCTTCATCCCTCCACACCTCTCTCCACACCCTCTCCGCCGCCCACGGCCCCCTCCTCCTCCTTCGTCTTGGACCCTCCCGCCGCCTCCTCGTGGTCTCCTCTGCTGAAGTCGCCACCCACATCTTCAAGACCCACGATCTCGCGTTCTCGTCCCGGCCTGTGTTCGCCTTCGCGGAGAAGCTGCCCTTTGGGCTGGCGGGGTTCGTGACGGCCCCCTACGGCCCGTACTGGCGGTTCGTGAAGAAAGTATGCATGACGGAACTGCTGAGCCCGCGGCAGCTGGAAGGGTCTAAGAAGGTGAGAAAGGAAGAGATGGAAGGTTGGGTGAAAGGGATGTTGGAGCATGTGAGAGAGAAGGGTGGTGCAATCGATTTGGGCTCTCAACTTATGAAACTCACCAACAACATTACTTGCAGGATGGCCATGACCACCTGTTGTTTGGAGAAATACGAGGATGCAGAGAAGATAAGGCAGCTGGTAAAGGAATCCTTCGAGCTTGCTGCAAAGTTATGCTTTGGAGATGTGTTGGGTCCTCTGAAGCAGTTGAGTTTCTGGGTGTATGGGAAGAAGGCTTTGGATGTGAGCAAAAGGTACGATGAGTTGTTGGAGAAGGTGCTGAAGGAGCATGAACACAAAAGATCATCACGTGACAGTGAAAACCAAAGGGATTTGATGGACATTCTGCTCGATGTTCACCACGATCCTCATGCAGAGTTCAAGATCACAAGAACTCATATTAAAGCCTTCTTCTTGGATCTCTTCATTGCAGGCACAAACACCTCAGCAGAAGGGACGCAATGGGCGATGGCTGAGCTGCTGAACCACCCTGAAGCTTTTGAAAGGGTGAGAAAGGAGATAGAGTTGGTGACAGACAATGGAAGGCTAGTTGAGGAGTCAGATGTTGGAAAAATGCCATATTTGCAAGCAGTTGTGAAGGAAACACTGAGACTCCATCCACCAGCACCAGTGACGACAAGAGAGTGTCGACAACACTGCAAGATAAATGGGTTTGACGTGGCAGCAAAGACAGCAGTGGCAATCAATTTGTATGCCATAATGAGGGACCCTGATTCCTGGGACAATCCGAATGAGTTTGTCCCTGAAAGGTTCTTCTTGCAAGAGGAGGATGAGAGAATGAAGTTCAATTTTGTTCCATTTGGAGGTGGAAGGAGAGGCTGTCCTGGAACAGAACTTGCTTTTATCTTCATAAACACTGCAGTGGCTGCTATGGTGCAGTGCTTTGATTGGAAGATTGGTGAAGATGGAAAAGGAAAAAAGGTTAATATGCAATCTGGTTCATCTGGCTTGTCTTTGAGCATGGCTCAACCCCTTCTCTGTGTTCCTCTACTACATTTTAATCCATATCATGCATAA 1515 0.497 MIETLLFFFLLLFFFLIVRCTGKSTSDHLHLPPSPPSLPLLGHLHLLSSSLHTSLHTLSAAHGPLLLLRLGPSRRLLVVSSAEVATHIFKTHDLAFSSRPVFAFAEKLPFGLAGFVTAPYGPYWRFVKKVCMTELLSPRQLEGSKKVRKEEMEGWVKGMLEHVREKGGAIDLGSQLMKLTNNITCRMAMTTCCLEKYEDAEKIRQLVKESFELAAKLCFGDVLGPLKQLSFWVYGKKALDVSKRYDELLEKVLKEHEHKRSSRDSENQRDLMDILLDVHHDPHAEFKITRTHIKAFFLDLFIAGTNTSAEGTQWAMAELLNHPEAFERVRKEIELVTDNGRLVEESDVGKMPYLQAVVKETLRLHPPAPVTTRECRQHCKINGFDVAAKTAVAINLYAIMRDPDSWDNPNEFVPERFFLQEEDERMKFNFVPFGGGRRGCPGTELAFIFINTAVAAMVQCFDWKIGEDGKGKKVNMQSGSSGLSLSMAQPLLCVPLLHFNPYHA 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00085 504 SUPERFAMILY Cytochrome P450 29 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 492 - -
Vimu5g00085 504 Pfam Cytochrome P450 32 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vimu5g00085 504 CDD CYP93 78 495 - -
Vimu5g00085 504 Gene3D Cytochrome P450 16 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00085 504 FunFam Cytochrome P450 family protein 23 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00085 Vimu-Chr5 649584 652519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00085 5 502 Cytochrome P450 AT4G15360 45.059 1.67e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00085 K23814 - gmx:100790065 680.633