Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00074 TTTCGGTTTGTGATTAAAGGTCCCTACACACATGGCTATGCGCCACATCTGCACCACCACCTGAGGCACAAGCAACATGTCCAAATGAAGCATAGAAACAGCATAGACAACAGTGACATTACAACCTCGAGATCTTTGCCTGAGACACCGAGAATCTCCTCAACAAGAAGATCAGATGTTGATTATTACCACCACAGATTCTCACTCCAAATCAATAAGGAAAACATGAATCTTGCTAAGGATTTGGAGTTCCCTAGGCTCTCGTTTTCCAAAAGAAAGTGTGATGCGAACAGTGGCAGGAGTCCAAGCCACTATGCTAGGCAAATAGTCAAACAGATCCTGTGTAGTAGCAAGGTTCAACAGCAGGGTTCAATCAGATACAGATATGGATACCCCAGTGAGAAGTTGAATGGGAGAAGGTGTTCAGTTAGAGTTGAAGGTGGGAATGGAATGGTTGTTCCAAGTTCAGAGGAAGAGAAGAGGAAGCTGAGAGTGTTGGTGGCTGGTGGAGGCATTGGTGGCCTTGTTTTCGCTCTGGCTGCAAAGCATAAAGGGTATGCAGTGAAGGTGTTTGAGAAGGATTTAAGTGCTGTTAGAGGTGAAGGTAGGAACAGAGGCCCAATTCAACTCTTGAGCAATGCCCTTGCTGTGCTGGAAGCCATCGATCAGAGTATTGCATGGCAGATAATGGAGGCTGGCTGTGTCATTGCCAATAGGACTAATGGCTTTGCTGATGGTCTATCTGGAGAGTGGTTCGGTGAGTATGATCTTTTGACTCCTGCTTCAAGGAAAAGGCTTCCTCTTACCCTAGTCATATGTAGGATGACACTGCAAGATATATTAGTCAATGCAGTTGGTCCAAACATACTAAGAAACAAATCTAAAGTTGTGGATTTTATTCAGGAACCTAGCAAGGTTAGAGTGATCCTTGAAAATGGTGAGCAACATGATGGTGATATCTTAATAGGAGCAGATGGAATATGGTCAGAAGTTCGTTCGAAACTCTTTGGGCGCCAAGAAGCAAATTACTCAGGTTTCACATCCTATAGTGGATTAACAAGTTATGTACCACCATATATTGATACAATTGGGTATCGAGTGTTCTTGGGCATGAACCAGTACTTTGTTGCTACAGATGTTGGCCATGGAAAGATGCAATGGTATGCTTTCCATGCGGAACCCCCATCAAATTATCCTTTCCTAGAAGGTATATTTACCAAATGTTGTGTAGAATTTGGATTCTATGTGGAGTTTTTAATGTTGTCTTTCTACTAA 1275 0.4298 FRFVIKGPYTHGYAPHLHHHLRHKQHVQMKHRNSIDNSDITTSRSLPETPRISSTRRSDVDYYHHRFSLQINKENMNLAKDLEFPRLSFSKRKCDANSGRSPSHYARQIVKQILCSSKVQQQGSIRYRYGYPSEKLNGRRCSVRVEGGNGMVVPSSEEEKRKLRVLVAGGGIGGLVFALAAKHKGYAVKVFEKDLSAVRGEGRNRGPIQLLSNALAVLEAIDQSIAWQIMEAGCVIANRTNGFADGLSGEWFGEYDLLTPASRKRLPLTLVICRMTLQDILVNAVGPNILRNKSKVVDFIQEPSKVRVILENGEQHDGDILIGADGIWSEVRSKLFGRQEANYSGFTSYSGLTSYVPPYIDTIGYRVFLGMNQYFVATDVGHGKMQWYAFHAEPPSNYPFLEGIFTKCCVEFGFYVEFLMLSFY 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00074 424 MobiDBLite consensus disorder prediction 23 57 - -
Vimu5g00074 424 PANTHER - 155 396 - -
Vimu5g00074 424 Gene3D - 164 407 IPR036188 -
Vimu5g00074 424 MobiDBLite consensus disorder prediction 34 53 - -
Vimu5g00074 424 SUPERFAMILY FAD/NAD(P)-binding domain 163 338 IPR036188 -
Vimu5g00074 424 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 332 - -
Vimu5g00074 424 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 164 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00074 Vimu-Chr5 557198 567766 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00074 43 136 TRM (TON1 Recruiting Motif) Superfamily AT5G51850 43.000 1.37e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00074 K09838 - gmx:100778602 453.751