Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00066 ATGTTTGTTGAACCTGGTCACACGATTCTTGTACATGCAGCAGCTGGTGGAGTAGGATCCTTATTGTGCCAATGGGCAAATTCTCTTGGTGCAACCGTTATCGGAACTGTATCCAATAAAATGAAGGCAGCTCAGGCCAAAGAGGATGGATGTCATCATGTAATAATCTACACAGAAGAAGATTTTGTTGCTCGTGTCAACGAAATCACATCAGGCAATGGAGTTGAAGGGTCGTTGGCTTGTTTGAAGCTTAGAGGTTACATGGTAAGTTTTGGGCAGTCATCAGGCACACCTGATCCGGTTCCATTATCTTCCCTGGCTACAAAGTCCTTGTTCCTGACAAGACCCACCTTAAAGCATTACAACGTCACTCGGGATGAGCTCTTGGAGGCTGCAGGAGACTTGTTTGCCAAGGTTTCTTCAGGTATCTTAAAGGTGCGAGTTACTGACACCTATCCCTTGTCTGAGGCAGCAAGAGCACATGAAGACCTGCAGAATCGGAAGACCACAGGATCTGTTGTGTTGCTACCCTAA 534 0.4625 MFVEPGHTILVHAAAGGVGSLLCQWANSLGATVIGTVSNKMKAAQAKEDGCHHVIIYTEEDFVARVNEITSGNGVEGSLACLKLRGYMVSFGQSSGTPDPVPLSSLATKSLFLTRPTLKHYNVTRDELLEAAGDLFAKVSSGILKVRVTDTYPLSEAARAHEDLQNRKTTGSVVLLP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00066 177 Gene3D - 3 121 - -
Vimu5g00066 177 Gene3D - 122 171 - -
Vimu5g00066 177 Pfam Zinc-binding dehydrogenase 17 105 IPR013149 -
Vimu5g00066 177 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 3 177 - -
Vimu5g00066 177 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 127 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00066 Vimu-Chr5 507821 509636 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00066 K00344 - gmx:100793768 303.523