Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00064 ATGTCATTTTTAAGGTTAATGGGAGCCAAGAATCCAACTCTCTTTCATCTGGTCACTCGTTCTGCACTCTCTTCTATTTCTTCTTCTTCTTCTTCTTCACTGACAATCAAGGCTTCGTTTTCATTATCTACAACAGACATGGTGAAAGCAATCAGGGTTCACGAACAGGGAGGCCCTCAGGTTCTGAAGTGGGAGGACGTGGAAATCGGAGAGCCCAAAGAAGGGGAGGTTCGCGTCAGGAACAAAGCTGTCGGAGTCAATTTCATTGATGTCTACTTTCGCAAAGGAGTTTACAAAGCCCCCTCTTTTCCCTTCACTCCAGGTATGGAAGCTGTTGGGGTTGTCACAGCTGTGGGTGCTGGACTCACTGGTAGGCAGGTTGGAGATCTTGTAGCTTATGCAGGTCAACCAATGGGCTCATATGCTGAAGAGCAGATACTTCCTGCAAATAAAGTAGTCCCTGTCCCTTCATCGATTGACCCACCTATTGCAGCATCCATCATGCTGAAGGGCATGACAACTCACTTTTTGGTTCGGCGCTGTTTTAAGGTTGAACCTGGTCATACAATTCTTGTCCACGCAGCAGCTGGTGGAGTTGGCTCCTTATTATGCCAGTGGGCAAATGCTCTTGGTGCAACTGTTATAGGAACTGTGTCAAATAAAGAGAAGGCAGCTCAAGCCAAGGAGGATGGGTGTCATCATGTTATAATCTCTAAAGAAGAGGATTTTGTTGCTCGCGTCAATGAGATTACGTCAGGCAATGGAGTTGAAGTAGTCTATGATTCTGTAGGAAAGGATACCTTTGAGGGATCTTTGGCATGCTTGAAGCTTAGGGGCTACATGGTAAGTTTCGGACAGTCATCAGGTTCACCTGATCCAGTCCCATTATCATCTCTGGCTGCAAAATCCCTGTTCTTGACAAGGCCCAGCCTAATGCAATATGTTGTCACCCGGGATGAGTTATTGGAGGCTGCAGGAGAGTTGTTTGCTAATGTTGCTTCTGGTGTCTTGAAGGTTCGTGTTAATCATACTTACCCATTGTCAGAGGCTGCAAAAGCACACGAAGACTTGGAGAATCGGAAGACTTCAGGATCCATTGTGTTGATACCATGA 1113 0.4618 MSFLRLMGAKNPTLFHLVTRSALSSISSSSSSSLTIKASFSLSTTDMVKAIRVHEQGGPQVLKWEDVEIGEPKEGEVRVRNKAVGVNFIDVYFRKGVYKAPSFPFTPGMEAVGVVTAVGAGLTGRQVGDLVAYAGQPMGSYAEEQILPANKVVPVPSSIDPPIAASIMLKGMTTHFLVRRCFKVEPGHTILVHAAAGGVGSLLCQWANALGATVIGTVSNKEKAAQAKEDGCHHVIISKEEDFVARVNEITSGNGVEVVYDSVGKDTFEGSLACLKLRGYMVSFGQSSGSPDPVPLSSLAAKSLFLTRPSLMQYVVTRDELLEAAGELFANVASGVLKVRVNHTYPLSEAAKAHEDLENRKTSGSIVLIP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00064 370 CDD QOR2 49 370 IPR047618 -
Vimu5g00064 370 SMART PKS_ER_names_mod 57 368 IPR020843 GO:0016491
Vimu5g00064 370 PANTHER QUINONE OXIDOREDUCTASE PIG3-RELATED 49 370 - -
Vimu5g00064 370 Gene3D - 57 364 - -
Vimu5g00064 370 Pfam Alcohol dehydrogenase GroES-like domain 75 133 IPR013154 -
Vimu5g00064 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 321 IPR036291 -
Vimu5g00064 370 SUPERFAMILY GroES-like 47 191 IPR011032 -
Vimu5g00064 370 FunFam Quinone oxidoreductase 1 170 314 - -
Vimu5g00064 370 Gene3D - 170 314 - -
Vimu5g00064 370 Pfam Zinc-binding dehydrogenase 198 306 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00064 Vimu-Chr5 502763 505494 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00064 K00344 - gmx:100793768 613.609