Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00033 ATGGGGATGGAGATGAGAATGATGATGGCCATGGTTGTTCTCATGTTCCTTCTGCAGATGGTGGCATCATCGGATCTCCGACCTGGGTTTTATTCAGAAACATGTCCAAACGCAGAAGTTATAGTACGAGATGTGATGAAAAGGGCCCTTGCGGTGGAACCCAGAAGTGTTGCCTCTGTTATGCGGTTCCAGTTCCATGACTGTTTTGTGAATGGGTGTGACGCCTCCATGCTGCTTGATGATACACCCACCATGGTTGGGGAGAAGCTTGCTCTCTCCAACATAAACTCCCTGAGATCATTCGAAGTTGTCGATCAAGTTAAGGAAGCCCTAGAGAACGCATGCCCTGGTGTTGTCTCCTGTGCTGACATCATTATCATGGCATCCCGAGATGCTGTCGCTCTGACAGGAGGACCCGATTGGGAGGTGAGGTTGGGAAGATTGGACAGCTTGAGTGCTAGTCAAGAAGACTCAAACGAAATAATGCCGAGTCCAAGAGCCAATGCGTCTGCTCTTATAGATCTGTTTCAGAAGTACAATCTGACTGTGAAAGACCTTGTTGCACTCTCAGGGTCTCACTCCATTGGTCAAGGTCGGTGCTTCTCCATCATGTTTAGGCTATACAATCAATCTGGAACTGGAAGGCCTGATCCTGCCATTGAGGCTGGCTATAGGGAATATCTTGATAGACTTTGTCCGCTGGATGTTGATCAGAATGTGACAGGGAACCTTGACTTTACGCCTCTTGTGTTTGATAATCAGTATTTCAAGGACTTGGTTGCTGGGAGAGGGTTTCTCAACTCTGATCAAACACTTTTCACATTCCCACAGACAAGGGAGTTTGTCAGATTCTTCAGTACAAATCAAGATCAATTTTTCAAAGCCTTTGTGGAAGGAATGCTTAAAATGGGTGACTTGCAGTCTGGTCGACCTGGGGAAGTTAGGACCAATTGCAGAGTCGTCAATGCTCGCCCTGCTCATTTGCTCTTTGAGTCCCAACACAACCTCCTCAGTAATAATAAATCAATTTACGATATGTAA 1041 0.463 MGMEMRMMMAMVVLMFLLQMVASSDLRPGFYSETCPNAEVIVRDVMKRALAVEPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMVGEKLALSNINSLRSFEVVDQVKEALENACPGVVSCADIIIMASRDAVALTGGPDWEVRLGRLDSLSASQEDSNEIMPSPRANASALIDLFQKYNLTVKDLVALSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEAGYREYLDRLCPLDVDQNVTGNLDFTPLVFDNQYFKDLVAGRGFLNSDQTLFTFPQTREFVRFFSTNQDQFFKAFVEGMLKMGDLQSGRPGEVRTNCRVVNARPAHLLFESQHNLLSNNKSIYDM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00033 346 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Vimu5g00033 346 Gene3D - 29 322 - -
Vimu5g00033 346 PANTHER PEROXIDASE 72-RELATED 18 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 FunFam Peroxidase 163 303 - -
Vimu5g00033 346 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vimu5g00033 346 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 SUPERFAMILY Heme-dependent peroxidases 25 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu5g00033 346 FunFam Peroxidase 29 171 - -
Vimu5g00033 346 Gene3D Peroxidase, domain 2 163 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00033 Vimu-Chr5 346037 347503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00033 5 332 Peroxidase AT2G22420 72.644 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00033 K00430 - gmx:100796737 573.163