Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02337 ATGCCAACTTTCACATTCCTTGTCAAGCCAATTGCTCTCACTGGTTTTGTGGTATCCTTCGCTTTCTCTTTCCACCCTTCAATCTTTCTCCCATCAATTCTCAACCTTTTTCATTTTGCAGCAAATTGCATCATGCTCGTCTGGCAGCACGCATCAGGAACAAGTTCTTGCAAATGCCCTCTTTGTCGCCGACCCATCACTCTCTTAATCCCCACCGAACACTCTCTCAGCCAGCGTCATGACCCTGAAGTTGCTCAGATTCTCTCCAAAATCCATGCTTATAACCGTGTCTTCGGTGGCCAACCCTCCTCTTTTTTTCAGAGAGTGCAAGATCTTCCTTTTCTGTTGCACAGGCTGCTTCGGGAGTTCCTAAACCCTCAAAGATCCCTTCCTCTTGTCATCCGTGCTCGTGTCTTTGTTGCTATGATAGCAAGTGTTGTATACATCCTGAGTCCAATTGACCTCATTCCTGAAGCTATATTAGGAATAGTTGGTCTCTTAGATGATGTCTTAATTGGGTTGATCTGCTTCCTACATGTTGCTGCCCTTTATAGATCAGTTCTTTATCTCCGTCATGCGGGTTCCTGA 588 0.4541 MPTFTFLVKPIALTGFVVSFAFSFHPSIFLPSILNLFHFAANCIMLVWQHASGTSSCKCPLCRRPITLLIPTEHSLSQRHDPEVAQILSKIHAYNRVFGGQPSSFFQRVQDLPFLLHRLLREFLNPQRSLPLVIRARVFVAMIASVVYILSPIDLIPEAILGIVGLLDDVLIGLICFLHVAALYRSVLYLRHAGS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02337 195 Pfam Protein of unknown function (DUF1232) 140 172 IPR010652 -
Vimu4g02337 195 PANTHER UNCHARACTERIZED 39 192 IPR038896 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02337 Vimu-Chr4 25124192 25125736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02337 45 195 C3H Transcription Factor Family AT1G72175 67.550 1.40e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02337 K15707 - gmx:100306204 259.996