Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02330 ATGGCTTCTATAGAATGGCCACAAGAACAACTTTCCATAGCTTTTCTTTCTTCTACTTTTTATCCATATTTTCTCTTCTTTCTTCTTGCTGTTGCTGTGTTGAAGCTAGCAAGAAGATCAAAAAACAAAGCCAGTTTCAATTTGCCTCCATCACCAAGAAAGTTACCAATCATTGGCAATCTTCATCAGATAGGCACATTGCCATACCGTTCTTTCAGTTCCCTCTCACAAAAGCATGGTTCTCTGATGTGGTTGCAGTTGGGGCAGACTCAGACTTTGGTCATTTCATCAGCAGATTTGGTGAGGGAAATCATGCAAAATCATGACTTAACCTTCTCAAACCGACCCAAAATCACAGCAGCCAGGTACATACTGTACGGAGGTAATGACATTGGTTTTTCATCCTATGGAGAAAGCTGGAAACTGAAAAGAAAAATATGTTCCCTTGAACTTCTCAGTGCCAAAAGGGTGCAGTCATTTCGCCTCATCAGGGAACAAGAGGTTGCAGAATTGGTCAAAAAGATAGGCAAAGCAACCTTGAGAGAAGCATCTTCTGTGAATCTAAGTGAGTTGCTTCTTGAAGTATCAGACAACATCATCTGTAAATGTGCTCTTGGACAGAAGGTCGATAGCAGCAGCGTCAAAGAGCTTGCAAGGAGGTTGATGATTCAACTTGCAGCTGAAACTGTGGGGGATTACTTTCCCTTGCTCAGTTGGGTAGATTTTCTGACTGGCAAAATTCAAGAATTCAAATCCATTTTTGAAGCATTTGATATCTTTTTAGATGAGCTAATTGAGGAGCATAAGACGGTTCAGAGGGAAGCTGATCACTGCTCCACTGAGAACGGCTTTGTGGATATTCTCTTCCAATATCAGAAGAATGCCATGCCTGATTCTGAGCTCACCAATGATGACATCAAATCAATTCTAATGGTTTTCCTCCTATTCTGTTCTATTGCCTTCTTTTTATTGTTTTTCTCAAACACTTTAACTCACTCACTTACTATCCAAGGAAGTGACACAACTGCATCAACACTAGAGTGGGCTATGGCAGAGCTGATGAGAAATCCAACGAAGCTGAAGAAAGCTCAGGAAGAGGTGAGAAAAATTGTAGGGAATAAATCAAAAGTAGAAGAAAATGACATAAATCAAATGGACTACATGAAATGTGTAGTCAAAGAAACTCTAAGGTTACATCCAGCTGCTCCACTCTTGATTCCAAGAAAGACATCATCTACATTGAAACTGAGAGGATATGATATTCCTCCAAAAACACTGGTATATGTGAATGCATGGGGGATTCAGAGGGACCCTGAAATCTGGGAAAGGCCTGAAGAGTTCATTCCAGAGAGACATGGTAATAACCATGTTCCTTTGAAAGGCCAATTCATTCCATTTGGTTTTGGGAGAAGGACATGCCCTGGAATGACCTTTGGACTTGCTAACGTTGAGTATACACTGGCCAACCTTCTTTATTGGTTCAATTGGAAGCTACCTATATCTCATTCTTCTGCACAAGACATAGACATGACTGAGACATATGGGATTGTTACCTCCATAAAAGATATGATTGTAGCAGGAAGTGACCCAACTGCATCAACACTAGAGTGGGCTATGGCAGAGCTGATGAGAAATTCAACGAAGCTGCAGAAAGCTCAGGAAGAGGTGAGAAAAATTGTAGGGAATAAATCAAAAGTAGAAGAAAATGACATAAAGCAAATGGACTACATGAAATGTGTTGTGAAAGAAACTCTGAGCCCTGAAGAGTTCATTCCAGAGAGACATGGTAATAACCATGTTCCTTTGAAAGGCCAATACATTCCATTTGGTTTTGGGAGAAGGGCATGCCCTGGAATGACCTTTGGACTTGCTAATGTTGGGTATACACTGGCCAACCTTCTTTATTGGTTCAATTGGAAGCTACCTACATCTCATTCTTCTGCACAAGACATAGACATGACTGAGACATATAGGCTTGTTACCTCCATGAAAGTGCCACTTCATGTCAAACCACTTCCCTTTGAATCAAGCTTCTAA 2037 0.4075 MASIEWPQEQLSIAFLSSTFYPYFLFFLLAVAVLKLARRSKNKASFNLPPSPRKLPIIGNLHQIGTLPYRSFSSLSQKHGSLMWLQLGQTQTLVISSADLVREIMQNHDLTFSNRPKITAARYILYGGNDIGFSSYGESWKLKRKICSLELLSAKRVQSFRLIREQEVAELVKKIGKATLREASSVNLSELLLEVSDNIICKCALGQKVDSSSVKELARRLMIQLAAETVGDYFPLLSWVDFLTGKIQEFKSIFEAFDIFLDELIEEHKTVQREADHCSTENGFVDILFQYQKNAMPDSELTNDDIKSILMVFLLFCSIAFFLLFFSNTLTHSLTIQGSDTTASTLEWAMAELMRNPTKLKKAQEEVRKIVGNKSKVEENDINQMDYMKCVVKETLRLHPAAPLLIPRKTSSTLKLRGYDIPPKTLVYVNAWGIQRDPEIWERPEEFIPERHGNNHVPLKGQFIPFGFGRRTCPGMTFGLANVEYTLANLLYWFNWKLPISHSSAQDIDMTETYGIVTSIKDMIVAGSDPTASTLEWAMAELMRNSTKLQKAQEEVRKIVGNKSKVEENDIKQMDYMKCVVKETLSPEEFIPERHGNNHVPLKGQYIPFGFGRRACPGMTFGLANVGYTLANLLYWFNWKLPTSHSSAQDIDMTETYRLVTSMKVPLHVKPLPFESSF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02330 678 Pfam Cytochrome P450 516 585 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 Pfam Cytochrome P450 331 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 Pfam Cytochrome P450 587 644 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 Pfam Cytochrome P450 49 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 SUPERFAMILY Cytochrome P450 47 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 CDD CYP71-like 78 521 - -
Vimu4g02330 678 SUPERFAMILY Cytochrome P450 516 672 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 Coils Coil 549 569 - -
Vimu4g02330 678 Gene3D Cytochrome P450 519 585 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 Gene3D Cytochrome P450 586 672 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 609 618 IPR017972 GO:0005506|GO:0016705
Vimu4g02330 678 Gene3D Cytochrome P450 33 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g02330 678 Coils Coil 261 281 - -
Vimu4g02330 678 PANTHER CYTOCHROME P450 71B11-RELATED 586 671 - -
Vimu4g02330 678 Coils Coil 360 380 - -
Vimu4g02330 678 FunFam Cytochrome P450 99A2 38 522 - -
Vimu4g02330 678 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02330 Vimu-Chr4 25074603 25079995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02330 520 672 Cytochrome P450 AT1G13110 32.512 3.27e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02330 K20617 - gmx:100785621 677.937