Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02266 ATGGCCAACTTTGAGATTCTCCTTCTCGTTGTTCTCTGCACTCTCCAGAGTTGCTTCGCCGCCTCCAACCCCACCAACTTCATAAAATCCTCCTGCAGCGCCACCCAGTACCCCGCCCTCTGCGTGGAGTCGCTCTCGGTGTACGCCGCCGCCATCCAGCAGGACCCACACCAGCTCGTCCAGACGGCTCTCTCCCTGGCCCTCAACCGAACCGAGTCTACCAAAACCTTCGTGGCCAAGTGCAACAAGTTCAGGGGTCTCAAGCCACGGGAGTACGCCGCCCTCAAAGACTGCGCCGAGGAAATCAGCGACAGCGTCGACCGCCTCTCACGGTCGCTGAAGGAGCTGAAGCTCTGCAAGGCGAACGGGCAGGACTTCGCCTGGCACATCAGCAACGTGGAGACGTGGGTGAGCTCTGCGCTCACCGACGAGAGCACGTGCGGCGACGGCTTCGCCGGAAAGGCGCTCAGTGGCAAGATCAAGGACTCCATCAGGGGCAGAATGGTGAATGTTGCTCAGGTCACCAGCAATGCCCTCTCTCTCATCAACCAGTATGCTGCCAAACACTAA 570 0.5982 MANFEILLLVVLCTLQSCFAASNPTNFIKSSCSATQYPALCVESLSVYAAAIQQDPHQLVQTALSLALNRTESTKTFVAKCNKFRGLKPREYAALKDCAEEISDSVDRLSRSLKELKLCKANGQDFAWHISNVETWVSSALTDESTCGDGFAGKALSGKIKDSIRGRMVNVAQVTSNALSLINQYAAKH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02266 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 185 IPR035513 -
Vimu4g02266 189 NCBIfam pectinesterase inhibitor domain 7 185 IPR006501 GO:0004857
Vimu4g02266 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 181 - -
Vimu4g02266 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 185 IPR035513 -
Vimu4g02266 189 FunFam Pectin methylesterase inhibitor 1 23 185 - -
Vimu4g02266 189 SMART PMEI_2 23 181 IPR006501 GO:0004857
Vimu4g02266 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 181 IPR006501 GO:0004857
Vimu4g02266 189 CDD PMEI-like_3 30 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02266 Vimu-Chr4 24659753 24661938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02266 28 182 Carbohydrate Esterase AT3G14310 29.487 5.70e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02266 - - gmx:100305900 311.997