Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02219 ATGGAATCCAAAGATGGTGATGATAAGAATGAAAAACATTTACTGCAACACCCTTTGGTGAAAGCAGGAGTTGTTGTTGAAGAAGCATCTTCTACTGTTGTTAATCCTCAACAAGCACAATACCAGATTCCACAACAAGGTTTAATGGAGATTTACATGACTCCTCAGAACATAGCACAATCGTTACACACAGGAGGTAGTGCTACATCAGATAGAAAACGAGGCACATCAAAAGATAAGAGCTTTGAGAGAAGACAGAAGAGGATGATCAAGAATAGAGAATCTGCTGCACGTTCTAGAGCAAGAAAACAAGCTTACACAATTGAATTGGAGCAAAAAGTCTCCCGTCTGGAAGAAGAAAATCAAAAGCTCAGGAAACAAAAGGAAGTAGAGGATATATTATCGAGTGTGTCACCTCAAAAACCAAGATACCAGATTCGTCGAACTACATCAGCTTGGTTTTGA 465 0.3914 MESKDGDDKNEKHLLQHPLVKAGVVVEEASSTVVNPQQAQYQIPQQGLMEIYMTPQNIAQSLHTGGSATSDRKRGTSKDKSFERRQKRMIKNRESAARSRARKQAYTIELEQKVSRLEEENQKLRKQKEVEDILSSVSPQKPRYQIRRTTSAWF 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02219 154 Coils Coil 103 134 - -
Vimu4g02219 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 127 IPR004827 GO:0003700|GO:0006355
Vimu4g02219 154 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 82 134 - -
Vimu4g02219 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Vimu4g02219 154 CDD bZIP_plant_BZIP46 84 129 - -
Vimu4g02219 154 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 151 IPR043452 GO:0003700|GO:0045893
Vimu4g02219 154 MobiDBLite consensus disorder prediction 72 103 - -
Vimu4g02219 154 SMART brlzneu 80 136 IPR004827 GO:0003700|GO:0006355
Vimu4g02219 154 SUPERFAMILY Leucine zipper domain 84 129 IPR046347 GO:0003700|GO:0006355
Vimu4g02219 154 MobiDBLite consensus disorder prediction 59 103 - -
Vimu4g02219 154 Pfam bZIP transcription factor 84 127 IPR004827 GO:0003700|GO:0006355
Vimu4g02219 154 Gene3D - 83 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02219 Vimu-Chr4 24319117 24322492 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02219 58 154 bZIP Transcription Factor Family AT3G56850 66.019 1.33e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu4g02219 bZIP_1 7.8e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02219 K14432 - vra:106760633 237.654