Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02187 ATGACCGTGTCACAAAATGAATATATTGAAAAAATTGTTCAAGAGATAATAAATAATTTGAGTCCAAAAATTTTAAATCTTCCAAGGGATGAACTAGTTGGGATAGAGGATCGACTTCAAGACTTAGGAAATATTTTGCGTTTCGACCTTCGTAATGATGTTCGAGTTGTCGGAATAAGTGGAATGGGTGGCATAGGAAAGACAACTCTTGCTCGGGCTTTATATGAAAGAATTTGTCATCAATATAATCATCGTTGTTTTATTGATGATGTAAGCAAAATATTTGTAGATTCTCGTTCGTTGGGCTTACAAAAGCAATTAGTTTCTCAGACTCTAAATGAGAAAAATGTAGAGATTTGGAATGTTATCGAGGGAACATGTTTGGTGCAGTCCAAACTGAAGAATGCTAAGGCACTTATAGTTTTTGACAACGTTGATGAAGTTCAACAACTGAGGATATTTAGCGGAAATAGAGACAATTTGTTGCGAGAATGCTTAGGTGGAGGGAGCAGAATCATCATAGTTTCTAGGGATGAACATATATATTAA 549 0.3497 MTVSQNEYIEKIVQEIINNLSPKILNLPRDELVGIEDRLQDLGNILRFDLRNDVRVVGISGMGGIGKTTLARALYERICHQYNHRCFIDDVSKIFVDSRSLGLQKQLVSQTLNEKNVEIWNVIEGTCLVQSKLKNAKALIVFDNVDEVQQLRIFSGNRDNLLRECLGGGSRIIIVSRDEHIY 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02187 182 Pfam NB-ARC domain 51 158 IPR002182 GO:0043531
Vimu4g02187 182 PRINTS Disease resistance protein signature 132 146 - -
Vimu4g02187 182 PRINTS Disease resistance protein signature 56 71 - -
Vimu4g02187 182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 181 IPR027417 -
Vimu4g02187 182 Gene3D - 26 182 IPR027417 -
Vimu4g02187 182 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 181 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02187 Vimu-Chr4 24127887 24129341 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02187 53 182 WRKY Transcription Factor Family AT5G45050 33.846 4.35e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02187 - - var:108323681 312.383