Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02186 ATGGATACTTTGCGCATAAGTTATATTCAACTCGAAGAAAAATACAAACAAACATTTTTGGATATTGCTTGCTTCTTCAATTCTTATGATGAAGAATATGTGAAGGAAATTCTAAATTTCCGTGGATTTCATCCTGAAGATAGCATACAAGTTCTCATTGATAAATCACTCATTACCAGAGGTTTTCTTGGGAGCATACATATGCATAGCTTGCTAGTGGATTTGGGAAGGTGTATTGTTCGGGAACGGTTACCCAATTTGAAGCGTTTGGATCTCTCTTATTGCAAAAGTTTAATTGAGATGCCAGATGTAGCAGAGGCCCAAAATCTTGAATGGATCATTCTTATAGGATGCGTACAGCTTCAAAAACTCAATCCATCGATTGGAAGTCTGAGAAAGCTTGTTCTTTTGGATTTGAGAAACTGCATAAAACTACTAATAATCTTATCCAATACTATATTGGGACTGAATTCTCTTAAATATCTAGATGCGACCCACCACCATGCGACCCACCCATGGGGAGTCCCTGGAAGTATTATACCTGGAAGTCAAATACCGAGTTTGTTCAACAATGAGTTTGTTAACGTGGACATACAATACCTGGACAAAGAAACCCTAATCATCGATCCACGTTCCGTTCCCCATGACAATAATTTTATTGGTGTTTTGTGTTGCTTAATATTTCGTCTAGACAATGAACAAATTCCAATGGATTTTAGAACAGATCACATGTGGTTACATTATGAAGACGTTTCTACGAACGTAGGTGCTTTTGATCGTTTTTGTTTGAACAGGATTAAGAAATTGTTGGGTTACGATAGATCTTCTCATACTGTGGATGTGAAGAAATTTCAGTATCGCTGGGTAAATGAACAAGACCTGATTAACTTCAAAATGACGCAATGTGCAAATTTGACAGGTCGGAAGCGCAAGATTTCCGTAATTGAGGAAAACGGTTAG 960 0.374 MDTLRISYIQLEEKYKQTFLDIACFFNSYDEEYVKEILNFRGFHPEDSIQVLIDKSLITRGFLGSIHMHSLLVDLGRCIVRERLPNLKRLDLSYCKSLIEMPDVAEAQNLEWIILIGCVQLQKLNPSIGSLRKLVLLDLRNCIKLLIILSNTILGLNSLKYLDATHHHATHPWGVPGSIIPGSQIPSLFNNEFVNVDIQYLDKETLIIDPRSVPHDNNFIGVLCCLIFRLDNEQIPMDFRTDHMWLHYEDVSTNVGAFDRFCLNRIKKLLGYDRSSHTVDVKKFQYRWVNEQDLINFKMTQCANLTGRKRKISVIEENG 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02186 319 Gene3D Ribonuclease Inhibitor 58 191 IPR032675 -
Vimu4g02186 319 SUPERFAMILY "Winged helix" DNA-binding domain 3 83 IPR036390 -
Vimu4g02186 319 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 85 IPR044974 GO:0006952
Vimu4g02186 319 SUPERFAMILY RNI-like 74 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02186 Vimu-Chr4 24125283 24127632 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02186 1 89 WRKY Transcription Factor Family AT5G45050 39.326 3.98e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02186 - - vra:111241588 263.462