Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02175 ATGGTCACTCAAAGGCTTAGAAATTGTACAAACTTCCTTGAGAAGTCCAAACACCACTTTGCCATGATTGCTTTGCAATTTGGCTATGCCGGCATGAACATCATCACCAAGGTTTCCCTCAACCGTGGAATGAGCCATTATGTTCTTGTCGTTTATCGCCATGCCTTTGCCACTGCTGTCATAGTTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATCACATTCCGAATTTTCATGCAAATTTTCATCCTTGCTCTGCTTGGGATGGAGAAGTTGAACATGAAGAAGGTGAGGTGCCAAGCAAAGGTGGTAGGAACATTGGTGACTGTGGGTGGAGCCATGGTGATGACCTTGTACAAAGGACCTCTGGTGGAGATGGTTTGGACCAAACATGCCCTTAATCAGAACCAAACCAATAATGCAACAACAACAAATAACGGAACAACACCTTCAGACAAAGATTGGCTCATAGGCTCCATTTTCCTAATCATTGCCACACTTGCTTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCTATTGAAACCTACAAAAATCACCAGCTAAGCCTCACATCACTGATATGCTTCTTAGGCACTATTCAAGCTATTGCTGTTACTTTTGTTATGGAACACGATCCATCAGTGTGGACTATTGGCTGGGATATGAACTTGCTTGCTGCTGCATATGCTGGGATTGTTACATCAAGCATATCATACTATGTTCAAGGGTTGGTGATTAAGAAGAAAGGGCCTGTTTTTGCAACTGCATTTAGCCCTCTCATGATGATCATTGTAGCCATCATGGGCTCCTTTATCCTTGCAGAACACATTTTTCTTGGAGGTGTGGTTGGTGCGATCTTGATCGTTATAGGGTTATATTCAGTTCTATGGGGAAAGCACAAAGAAGAAGTGGAAAATAAAGTGGTGGAGGATATTCCCTTGCCTTTAAAGGGTGCAATGCTTCAAGCAAATAATCCAGATTCCAACAACATCTCTTCACTTGTCATTAATGTCACCACTGAACCTCCATTCAAATCTAACAGTTAA 1056 0.4233 MVTQRLRNCTNFLEKSKHHFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIVPFAFIFERKAQPRITFRIFMQIFILALLGMEKLNMKKVRCQAKVVGTLVTVGGAMVMTLYKGPLVEMVWTKHALNQNQTNNATTTNNGTTPSDKDWLIGSIFLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFLGTIQAIAVTFVMEHDPSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEHIFLGGVVGAILIVIGLYSVLWGKHKEEVENKVVEDIPLPLKGAMLQANNPDSNNISSLVINVTTEPPFKSNS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02175 351 PANTHER WAT1-RELATED PROTEIN 20 91 IPR030184 GO:0016020|GO:0022857
Vimu4g02175 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 304 - -
Vimu4g02175 351 Pfam EamA-like transporter family 160 299 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02175 Vimu-Chr4 24045821 24049325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02175 1 341 Nodulin-like Gene Family AT5G07050 59.079 2.12e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02175 - - gmx:100804359 517.694