Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02172 ATGGAATCGCCACAGTCAGGTTCAAGAGGAGCAGAAGCTCTTAAACATGTAGTTCCTGGCTCATCTATTTCTGTTAAATATCACCCACTTTTTGGACCTCATGATGACCTCCTCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGCATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAAGATGCAGTTCTCTGTACTCAATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCGGTTCTGCTTATACCACCAGCGAATCATTCAGAATTTTGTGAAAATCCACAAAACAATGATAGTAATAAGGAAGAAGAGAAAGTTGTTGCACCTGTAATCAAAGTTGTATCTGGTAATATCGAGCTTGTCGAGGCAGCCCCCAGACTTGATAAACTTAAGTCTTTTCTATTAGAAAAGACTTACAATTTTGAGGAATATGATGTGGAAAATTTAGAAGACAACCAGGAATCTACAATAGGATTATATAGCTGGAATGATCTTGTCGACAATATCCAAGCTAGTGATGAGGAGTTAAGGTCTGGACTGCAGGCTCTTTCCGCAGTGGAGATTAATGGATATTGGAGATTAGTAGATGGGAGTTACATGGACATGATTCTTGGAATGCTTTTGAAAAATTCGGTGTTAAATGATTGGTCACTTAATGCTTTAAACGAAGATGAAGTTGTGAGTACACTGGTATCAGATGGATTTCCTGGGGTGCTAGCAAGGCATTGTTTGTGTACATATGGCACCAAAGTAAATGAAGGCATGCCTGGCTGTGCCTGGAAATTGGATGAGAAGCGAGTATGTATCCATTTTGCAAGAGAAATCCTGAAAGGGGGTAAAAGGAAGTTAGAGAGTTTCATGGATGAATGGAGGCAGAAGGTTCCAGATGAAATGCAGCCAACTGTTAATCTTTTGGAAGGAGAGGTATTAATAGAGAGAGTTGGAGTTGAGACATGGATTCGTGCCTTCAGCGTCGCATCTTTGCCTTCAAATCCGGCTGAGCGTTTCACCATTCTTTTCAGAGAGAGGACAAAATGGGAATGGAAAGATCTGCAGCCATATGTCAGAGATCTGAAAATACCAGGTCTTTCTTCAGAAGGTTTGCTACTCAAGTACACTCGAAGGACACAACCATCACCTGATGCGGAACCAATTTTCAGCGCAAGATAG 1188 0.4133 MESPQSGSRGAEALKHVVPGSSISVKYHPLFGPHDDLLLLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLIPPANHSEFCENPQNNDSNKEEEKVVAPVIKVVSGNIELVEAAPRLDKLKSFLLEKTYNFEEYDVENLEDNQESTIGLYSWNDLVDNIQASDEELRSGLQALSAVEINGYWRLVDGSYMDMILGMLLKNSVLNDWSLNALNEDEVVSTLVSDGFPGVLARHCLCTYGTKVNEGMPGCAWKLDEKRVCIHFAREILKGGKRKLESFMDEWRQKVPDEMQPTVNLLEGEVLIERVGVETWIRAFSVASLPSNPAERFTILFRERTKWEWKDLQPYVRDLKIPGLSSEGLLLKYTRRTQPSPDAEPIFSAR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02172 395 Pfam Sister chromatid cohesion protein Dcc1 38 361 IPR019128 GO:0007064|GO:0031390
Vimu4g02172 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 14 395 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02172 10 395 C3H Transcription Factor Family AT2G44580 56.888 6.92e-160 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02172 K11271 - gmx:100807595 659.833