Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02114 ATGGGTTTGGTCTGTAGGCTGATGTTGCTCGCAGACTCCGTTATTCGTTATTTGATGAACATTTGGGTGTCCTCGGTCCCAAGCTTTCTGAAAGCCACCATGGTTGATCAGGTCCAACACCCTTCAATCATGGACAAGGTTGCTGGTCAGCTCCATCTCCGTTCTGGTTTTTCATCTGGTATTAATAGTTATGATGGAGCTTTCCGCCACCCTGCCATGTACCAAAGACCCTCCTTTGGGAACTACTCAAATGCTGCATTGCAGTATCCTGTGATGCCCTCATGCAAAACTACAATGGATTTGTCTGCTGTTGCAACAACAACATCCCCTGTTTTTGCTGCAGCCCCAGCAGAGAAAGGCCATTTTCTTATTGACTTTCTCATGGGAGGGGTTTCTGCAGCTGTCTCAAAAACTGCTGCTGCTCCCATTGAACGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGCTCAAAACTGGAAGGCTTTCTGAGCCCTACAAGGGTATTGGTGATTGTTTTAAAAGAACAATAGCAGATGAGGGTGGTGCTTCTCTATGGAGAGGAAACACTGCAAATGTCATTCGTTATTTCCCTACCCAGGCTTTGAACTTTGCATTCAAGGACTATTTCAAGAGGCTTTTCAATTTCAAGAAGGACAGAGATGGCTACTGGAAGTGGTTTGCTGGCAACTTGGCCTCTGGAGGTGCTGCTGGTGCATCGTCCCTTTTATTTGTTTACTCTCTTGACTATGCCCGAACCCGTCTTGCCAATGATGCTAAGGCTGCAAAGAAGGGAGGAGAGAGACAGTTCAAGGGTCTTGTTGATGTCTACAGGAAGACATTGGCATCTGATGGTGTTGCTGGTCTCTACCGTGGATTTAACCTCTCATGTGTTGGAATCATCGTGTATCGTGGTCTGTATTTTGGATTGTATGATTCCGTGAAACCAGTTGTCCTCACTGGATCATTGCAGGATAGCTTTTTCGCCAGCTTTGCCCTTGGATGGCTCATCACCAATGGTGCAGGTCTTGCATCATACCCAATTGACACTGTGAGAAGAAGAATGATGATGACCTCTGGTGAAGCAGTGAAGTACAAGAGTTCCTTGGATGCATTCCAACAAATCGTGAAGAATGAGGGTGCCAAGTCCTTGTTCAAGGGTGCTGGTGCCAACATCCTCAGAGCTGTTGCAGGTGCTGGTGTGCTTGCCGGGTATGACAAGTTACAGGTTCTTGTGTTCGGCAAGAAGTATGGTTCTGGTGGTGCCTAA 1269 0.4673 MGLVCRLMLLADSVIRYLMNIWVSSVPSFLKATMVDQVQHPSIMDKVAGQLHLRSGFSSGINSYDGAFRHPAMYQRPSFGNYSNAALQYPVMPSCKTTMDLSAVATTTSPVFAAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGIGDCFKRTIADEGGASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFKGLVDVYRKTLASDGVAGLYRGFNLSCVGIIVYRGLYFGLYDSVKPVVLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQIVKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02114 422 PRINTS Adenine nucleotide translocator signature 225 238 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu4g02114 422 PRINTS Adenine nucleotide translocator signature 122 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu4g02114 422 PRINTS Adenine nucleotide translocator signature 166 187 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu4g02114 422 PRINTS Adenine nucleotide translocator signature 199 211 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu4g02114 422 PRINTS Adenine nucleotide translocator signature 330 346 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vimu4g02114 422 ProSiteProfiles Solute carrier (Solcar) repeat profile. 325 411 IPR018108 -
Vimu4g02114 422 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 213 IPR018108 -
Vimu4g02114 422 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 317 IPR018108 -
Vimu4g02114 422 Pfam Mitochondrial carrier protein 224 319 IPR018108 -
Vimu4g02114 422 Pfam Mitochondrial carrier protein 121 217 IPR018108 -
Vimu4g02114 422 Pfam Mitochondrial carrier protein 326 413 IPR018108 -
Vimu4g02114 422 SUPERFAMILY Mitochondrial carrier 121 407 IPR023395 -
Vimu4g02114 422 Gene3D Mitochondrial carrier domain 123 418 IPR023395 -
Vimu4g02114 422 FunFam ADP,ATP carrier protein, mitochondrial 123 418 - -
Vimu4g02114 422 PRINTS Mitochondrial carrier protein signature 138 152 IPR002067 GO:0055085
Vimu4g02114 422 PRINTS Mitochondrial carrier protein signature 240 258 IPR002067 GO:0055085
Vimu4g02114 422 PRINTS Mitochondrial carrier protein signature 125 138 IPR002067 GO:0055085
Vimu4g02114 422 PRINTS Mitochondrial carrier protein signature 334 356 IPR002067 GO:0055085
Vimu4g02114 422 PRINTS Mitochondrial carrier protein signature 290 308 IPR002067 GO:0055085
Vimu4g02114 422 PRINTS Mitochondrial carrier protein signature 188 208 IPR002067 GO:0055085
Vimu4g02114 422 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 117 421 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02114 Vimu-Chr4 23415530 23418567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02114 34 422 Antiporters AT5G13490 81.934 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02114 K05863 - gmx:100789942 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02114 4 23415530 23418567 Vimu4g02114 4 23415530 23418567 ECH