Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02094 ATGCTGTCTTCAAACGTTGTTCCATCGTCCTCCCCTCTCACTTTCACCAAACCCAATCCCCATTTCTTCATCAATGCTTATCCCCATCTCAAACCAAATCTTCTCACAAGGTTTCAGACCCAACACAGAGCCATTCCTCTCCAAAGTTCCAAACTTTCTTTCACCCCAACATCTCAGATCCAACATTCAATCTCAAAGGTAAGATCTTTCAACGGATACCTTCTTCACCCTCTTCAGCCCTCGTCAAAACCCAGGCTTCAAATCGTTAAGGCTGCGTCTGAAACCAATCCTGGGGGAGAAAATGTTGACCCCAGTGTCCCCAAATCCAAGAATCTCAAACTTGCTCTGGTGTTTGGGCTATGGTACTTCCAGAACATCGTGTTCAACATTTACAACAAGAAAGTGTTAAACATATTCCCCTTCCCATGGCTTCTTGCCTCTTTCCAGCTCTTGGTTGGGTCCATTTGGATGCTGGTGCTTTGGTCCTCCAAGCTCCAACCTTGTCCGAAAATCTCGAAACCCTTCATCGTTGCTCTCCTCGGACCTGCTTTGTTCCACACAATAGGCCACATTTCAGCTTGTGTGTCATTCTCCAAGGTGGCTGTGTCCTTCACCCATGTCATCAAATCTGCAGAACCGGTTTTCTCTGTCATATTTTCTTCTGTCCTTGGTGATAAGTACCCCATTCAGGTTTGGCTCTCCATTCTACCCATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTGTGGGGTGCCCTCATTAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAGAGAAGTTTGCAGAATTTCAAGGAAGTTGATGGCTTAAACTTGTATGGCTGGATTACCATTCTTTCATTCCTGTACCTGTTTCCAGTGGCTATTTTTGTTGAAGGGTCTCAGTGGATCCCTGGGTATTACAAGGCTATTGAAGCTATAGGAAAACCATCCACATTTTATTTCTGGGTGTTGTTGTCTGGGGTTTTCTACCATCTTTATAACCAATCATCATACCAAGCACTTGATGAAATTAGCCCATTGACTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTGGTGATTGTATCTACGGTTTTGGTGTTCAGGAATCCTGTTCGACCTCTCAATGCCCTTGGATCTGCCATTGCAATTCTTGGGACTTTCCTGTATTCACAGGCAACATCCAAAAAGAAAGAAAAGAAAATTGAAGGGGAAAAGAGTAGTTAG 1260 0.4381 MLSSNVVPSSSPLTFTKPNPHFFINAYPHLKPNLLTRFQTQHRAIPLQSSKLSFTPTSQIQHSISKVRSFNGYLLHPLQPSSKPRLQIVKAASETNPGGENVDPSVPKSKNLKLALVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLLVGSIWMLVLWSSKLQPCPKISKPFIVALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDKYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQNFKEVDGLNLYGWITILSFLYLFPVAIFVEGSQWIPGYYKAIEAIGKPSTFYFWVLLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSTVLVFRNPVRPLNALGSAIAILGTFLYSQATSKKKEKKIEGEKSS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02094 419 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 112 412 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vimu4g02094 419 PANTHER SOLUTE CARRIER FAMILY 35 113 408 - -
Vimu4g02094 419 Pfam Triose-phosphate Transporter family 112 402 IPR004853 -
Vimu4g02094 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02094 Vimu-Chr4 23265222 23267705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02094 24 417 Antiporters AT5G17630 69.286 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02094 K15283 - gmx:100101869 716.457