Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02084 ATGGTAATTGCTTCTAAGATGGATGAGGGTAATCAATTGCATAGCACCACCATCACCACCACACCGTCACCGCCACCGCCACCACCTATTTCTTCCGAATCTGTGGCAACACCTTATATTAAGAGGCAAGTCACCGGTCATAATTTGAAACCAGTTTCACTTATATTAGGAGACAAGTCACCAATCATAATTTTTGATGATGCTGTTGTAAATAAAGCTGCCAAGCTTGCCCTCTTGGGCATCGTATTCAACAAGGGAGAAATCTATGTTGCAGGTTTTCGTGTGCTCGTTCAAAAAGGGATTTATGATGAATTTAAGAAGAAATTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGTGATCCTTTTGATCCTAAATTTCAACAAGGGCCTCAAGTTGACAAGAAGCAATTTGAAAAGATCCTTTCCTATATTCAGATTGGAAAGAAACAATGGGCCACCCTTTTGACAGGCGGAAAAAGAGTGGGAAACAAGGGTTACTACATTGAACCTACAGAGGAGTTAGGGTTTGGCGCCGGTGATGTGGAAGATTTGGGATCAGAATCCATGACAATCGATTGGAGGCTGTGGAAG 591 0.4264 MVIASKMDEGNQLHSTTITTTPSPPPPPPISSESVATPYIKRQVTGHNLKPVSLILGDKSPIIIFDDAVVNKAAKLALLGIVFNKGEIYVAGFRVLVQKGIYDEFKKKLVEKAKAWVVGDPFDPKFQQGPQVDKKQFEKILSYIQIGKKQWATLLTGGKRVGNKGYYIEPTEELGFGAGDVEDLGSESMTIDWRLWK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02084 197 Pfam Aldehyde dehydrogenase family 40 171 IPR015590 GO:0016491
Vimu4g02084 197 SUPERFAMILY ALDH-like 40 171 IPR016161 GO:0016491
Vimu4g02084 197 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 40 171 - -
Vimu4g02084 197 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 39 59 IPR016162 GO:0016491
Vimu4g02084 197 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 60 171 IPR016163 GO:0016620
Vimu4g02084 197 MobiDBLite consensus disorder prediction 1 34 - -
Vimu4g02084 197 FunFam Aldehyde dehydrogenase3 58 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02084 Vimu-Chr4 23134619 23139633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02084 40 171 Aldehyde Dehydrogenase Gene Family AT3G24503 65.152 4.70e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02084 K12355 - gmx:100791396 210.69