Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g02068 ATGGCATCCATCGATAAGCAAAAGAGAGAAGAAAAGGAACCGTACAGAATAGAAGAAGAAGAAGAAGAAGATAGCGAAGATGAAGAAGCATGGGACGATTGGGAAGGAGAGCGAGAATCGGAATTCGCGTGTCTCTTCTGTGACTCCCAGTACAGTTCGTGCAGTTCCTTGTTCGATCATTGCGCCTCCCTTCACCATTTCGATTTCCACGCGATTAGAGCAAGTCTTAAACTGGATTTCTATGCTTCCTTCAAGCTCATCAACTTCGTTCGCTCTCAGGTGTCAGAGAACAAATGTTGGTGTTGTGGATTAACATGCCAGTGCAAGCGTGACTTGCAGAATCATTTGCATGATGTGGTTGACTTTAATGAGATAAAGACTCTATGGAATGATGATAGATATCTAATACCTTTCATGCAAGATGATTCTCTGCTGTACAGTTTTGGGGAATGTGACGAAGAAGGTGAAGATGAGCAAATTACACCAATTGATGAAGATCTTATAAAGGATTTGATGAACATTGATGAGAGAATCTCTGACGATCATGATTCTGTGGAAAAAGTGCTAGTTGATGATGGAAAACGTGATGCTTCTTTTTCTATTGATCATTTGAATAGGGATAGTTCTTCAAAAAGGGAGCTTATTAATGGTAAAGACTCAGTGGGACATGCTTTGTGCAGTGATAAGGATCCGAAAAAGGGACCTTTAATTGCTAATTCTCAAAATCACATTGCAAAACATATTAAGAAGGTCAATGAAAGTTATTTTGGGTCATACAGTTCATTTGGTATCCATCGAGAGATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGTCAAGCAATTTTGAAGAATCCCTCCCTACTAAACGGGGCTGTGGTTATGGATGTTGGTTGTGGAACTGGAATCCTCAGGAGCAGCAAAGAATTGTCTCCATGCAAAAGTTTCCTGAAAGGGGTGTACCTATGTCTTGAAAAGGGCAAACCTTGCATTTTGGCAAGTTTCTGCCTTGAGTTGGAAATCAAGGGTGTAAATCCTACAAATACCTCCACTTGCGAGGTTGTGGCACCCCACTTGGTAGGTGCCTCATGCTCTGATTCACCCTTTTTTCTTATGGAGAAAATTAATGATGCACACCTGATTCGTATCGGCTCTTTCTGTTTGTTCATTTTTGGCAGTAGTGGTTATGAGGCCTATGGCTATGATAAGTACATATTCTGGGTTTTGTTGGCCTCTGGAGCTTCCAGGGTTATTGCTGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGGTTGCAAAGGATAATGGTCTTTGGTGGAATAAAAGCCAAAGTGGAATTGATGGTCACCCGAAGCAAGTCATAGAAGTGGTTCACGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCATAGTGTTGATGTATTGCTAAGTGAATGGATGGGATATTGCTTACTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGGGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCGGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCAACAAGTCTTCCATTTTGGGATAATGTGTGTGGTTTTGACATGTCTTGCATTGGGAAGGAGCTTGTCATGGATGCTGCCCAAATTCCTATAGTTGATGTTCTGGACTCACAAGATTTAGTTACCAGTTCTGCGATTCTACAGTCTTTTGACTTGGCAACCATGAAGCCCAATGAAGTCGATTTCACTGCGACTGCTACTTTGGAATTGAAACCAAGTGCTTCAGCAAAATGGTGCTGGTGCTATGGTGTTGTCCTATGGTTTGAAACTGGTTTTACAAGGAGATTCTGCCGAGAAACACCAGCTGTGTTATCCACATCCCCTTATACCCCAAGAACGCATTGGTCACAAACAATCTTAACCTTTCGAGAACCTATTGCAATAGGGTTTGGAAAAGAACAGAGGGGTAAACTGGAAGCAATTGGCACTGAGGTGCATCCCGCTGTAAATATCGATTTACGCATCAGCATTGTCCGATCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTACTGGTGTTAGTCCTGATGGTCAGAAACGTAGTTGGCCTGCTCAACTTTTCAATCTGCACAAAGATCACTGTGCCATGTTTTTCTTCTTGGCAGTTAGAATCAGTTTTGGAATGTTGCAGTTGTATTTGCTGACCTTTAGGCTCCAAATTTTGTTCTCTGGAAGTGCTTGA 2268 0.4224 MASIDKQKREEKEPYRIEEEEEEDSEDEEAWDDWEGERESEFACLFCDSQYSSCSSLFDHCASLHHFDFHAIRASLKLDFYASFKLINFVRSQVSENKCWCCGLTCQCKRDLQNHLHDVVDFNEIKTLWNDDRYLIPFMQDDSLLYSFGECDEEGEDEQITPIDEDLIKDLMNIDERISDDHDSVEKVLVDDGKRDASFSIDHLNRDSSSKRELINGKDSVGHALCSDKDPKKGPLIANSQNHIAKHIKKVNESYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLNGAVVMDVGCGTGILRSSKELSPCKSFLKGVYLCLEKGKPCILASFCLELEIKGVNPTNTSTCEVVAPHLVGASCSDSPFFLMEKINDAHLIRIGSFCLFIFGSSGYEAYGYDKYIFWVLLASGASRVIAVEASAKMAAVASQVAKDNGLWWNKSQSGIDGHPKQVIEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWDNVCGFDMSCIGKELVMDAAQIPIVDVLDSQDLVTSSAILQSFDLATMKPNEVDFTATATLELKPSASAKWCWCYGVVLWFETGFTRRFCRETPAVLSTSPYTPRTHWSQTILTFREPIAIGFGKEQRGKLEAIGTEVHPAVNIDLRISIVRSTEHRSIDISLEATGVSPDGQKRSWPAQLFNLHKDHCAMFFFLAVRISFGMLQLYLLTFRLQILFSGSA 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g02068 755 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 252 687 IPR025799 GO:0016274|GO:0018216
Vimu4g02068 755 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 45 701 IPR025799 GO:0016274|GO:0018216
Vimu4g02068 755 MobiDBLite consensus disorder prediction 1 15 - -
Vimu4g02068 755 MobiDBLite consensus disorder prediction 1 32 - -
Vimu4g02068 755 SUPERFAMILY beta-beta-alpha zinc fingers 26 161 IPR036236 -
Vimu4g02068 755 Gene3D - 516 715 - -
Vimu4g02068 755 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 258 304 IPR029063 -
Vimu4g02068 755 Gene3D Vaccinia Virus protein VP39 244 307 IPR029063 -
Vimu4g02068 755 Gene3D Vaccinia Virus protein VP39 405 514 IPR029063 -
Vimu4g02068 755 MobiDBLite consensus disorder prediction 16 32 - -
Vimu4g02068 755 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 409 665 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g02068 Vimu-Chr4 22993182 22998442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g02068 412 718 C2H2 Transcription Factor Family AT3G12270 67.419 2.34e-140 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g02068 K11436 - gmx:100778113 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02068 4 22993182 22998442 Vimu4g02068 4 22993182 22998442 ECH