Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01991 ATGGGTTCTAACTGTGAAGAGATTAATGGTGAAGAAAATGATCCATGCCTATCTGCTTTGCTTCTAAGCTTCAGCCCAATGGTTTACACTGCTGTGTTGAATGCTTCCATTGAGCTCAACTTGTTCGAGATCATTGCTAAAGCAACAACAACAACAACCCCACTTGGCGTTTCAGCTTCTGAGATTGCTTCTCAGCTTCCAATTCAGCACAAAAAACTGCCCCAAAGGCTTGATCGCATGCTGTCTGTTCTTGCAAGTCACTCTCTTCTCACTTGCTCTACACTCACAAATCAAGATGGTAAGGTCCAAAGACTCTTTCAGCTTTCACCTTCCGGAAAGTACTTCACCAATGCAGAAGCCACTGCTTCTTTGGCCTTGTTCACAACGTTTATGAATCAGCCAAAGCTTGTTCAGGCATTCCTTAATTTCAAGGAGATAATTCTTGACTGTGATAAGGGCCTATACATGAAAGTTCATGGAATGCCTATTTTTGAAGGCATACAATCTGATCCAACATGGAATCATATCTTCAATGAAGCAATGGCCAATATATGCAGAATAGAGATGACAAAGATACTTGAAATATACAGTGGATTTGAAGGAATATCACTGCTTATTGATGTGGGAGGAGGAGTAGGGCAAAGTTTGAATATCATAATCTCTAAGTATCCTTCCATAAAGGGTGTCAATTTTGATCTTCCACAAGTAATAAAACAAGCTCCACCTTATCCAGGAATTGAACATGTTGAAGGAGACATGTTTGAAAGTGTTCCAAAAGGTGATGCCATACTATTGAAGGGCATATTGCACAATTGGTCGGATGAAAATTGTTTGAAAGTTCTAAATAATTGCTACAAAGCTTTGCCAGAAAATGGAAAAGTGGTTGTTGTAGATTTCATAATGCCTGAAGCAATTGGTTCTTCTGAAGCAGATAAGATGGTTACTAGCTTTGATAACCTGATGTTTCTTGATGGAGGAAGTGAAAGAACAGAAAAAGAGTTTATGAATTTATGCCAAATTTCTGAATTTTCTTCTTTCAGAGTTGTTTCTCGTGCCTTTACTGCTCTAGGAGTAATGGAATTTTATAAATAA 1092 0.3837 MGSNCEEINGEENDPCLSALLLSFSPMVYTAVLNASIELNLFEIIAKATTTTTPLGVSASEIASQLPIQHKKLPQRLDRMLSVLASHSLLTCSTLTNQDGKVQRLFQLSPSGKYFTNAEATASLALFTTFMNQPKLVQAFLNFKEIILDCDKGLYMKVHGMPIFEGIQSDPTWNHIFNEAMANICRIEMTKILEIYSGFEGISLLIDVGGGVGQSLNIIISKYPSIKGVNFDLPQVIKQAPPYPGIEHVEGDMFESVPKGDAILLKGILHNWSDENCLKVLNNCYKALPENGKVVVVDFIMPEAIGSSEADKMVTSFDNLMFLDGGSERTEKEFMNLCQISEFSSFRVVSRAFTALGVMEFYK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01991 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 352 IPR029063 -
Vimu4g01991 363 Pfam Dimerisation domain 32 85 IPR012967 GO:0046983
Vimu4g01991 363 SUPERFAMILY "Winged helix" DNA-binding domain 15 118 IPR036390 -
Vimu4g01991 363 Gene3D - 28 192 IPR036388 -
Vimu4g01991 363 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Vimu4g01991 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Vimu4g01991 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Vimu4g01991 363 PANTHER O-METHYLTRANSFERASE 30 353 IPR016461 GO:0008168
Vimu4g01991 363 Gene3D Vaccinia Virus protein VP39 174 351 IPR029063 -
Vimu4g01991 363 Pfam O-methyltransferase domain 148 341 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01991 Vimu-Chr4 22315621 22316996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01991 1 353 Monolignol Biosynthesis Gene Families AT5G54160 45.706 2.27e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01991 - - gmx:100784030 583.948