LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu4g01924	ATGAAAGAATATAGTAATTCAGCTATTCAACTCCCTACTGTTTCATCTCCTCTATCTTTTGATAAAGAAGCTCGCCTCTCACTCAGACCTCTTATGTCTCAAAGATGCAATTCTAAGTTCTGTGGACAAGCATACATATATCATTCGTCTGGTTTCCGAATCCCAGCAAATGCTGAGAAGCCAGAATGGTGGTGGAGAGCTTTATCCTGTATTCCCTACCTAATAGCATTGCAGATGTCTGCAACTGGGTTTTATTTAGAACCAATCATTCAAAAATTTCCATTCTTTCAGAATTTGATTTTCTATATCCCAGGAGGTGTCAACCGATTACCAATCTGGTTTCCCATGTTATACTGCTATCTGGCTATTGTAGGAGTGGTGAAAAACAGGGACTTACCCCTTATCTTCAGATTCCATGTAATGACGGGAATGCTGCTGGAACTTGCTCTTCAGATAGTGTACATTTCAAGCAACTTCATGCCACTTATACACTTCCCAGGAGGCACGTTGGGGTCATATTACTGGGCTGGTGTTGCATTGGCATTTATTTTTATAATGATAAAGTGCATAAGGTGTGCACTTCTGGGAACATTTGTGAGCATCCCTTTGGTCAGTGAATCAGCTTTCATTCATTCTCTATTTGGTTTAGGAGGATTACAACGGCCTTTTTAG	672	0.4033	MKEYSNSAIQLPTVSSPLSFDKEARLSLRPLMSQRCNSKFCGQAYIYHSSGFRIPANAEKPEWWWRALSCIPYLIALQMSATGFYLEPIIQKFPFFQNLIFYIPGGVNRLPIWFPMLYCYLAIVGVVKNRDLPLIFRFHVMTGMLLELALQIVYISSNFMPLIHFPGGTLGSYYWAGVALAFIFIMIKCIRCALLGTFVSIPLVSESAFIHSLFGLGGLQRPF	223

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu4g01924	223	Pfam	Chloroplast import apparatus Tic20-like	33	208	IPR005691	-
	Vimu4g01924	223	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	20	212	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu4g01924	Vimu-Chr4	21252224	21257436	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu4g01924	53	222	Chloroplast and Mitochondria Gene Families	AT4G03320	52.353	7.82e-68	208

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu4g01924	-		-	gmx:100790611	373.629