Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01913 ATGACGTCGGGGACGAGACTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGAAGAGAGAGAAGAAGAAGAGCCATAGCAGCGAAGATCTTCGCAGGTCTGAGGATGTATGGAAACTTCAAACTCCCCAAACACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAAGCAGGTTGGACCGTTGAACCAGATGGAACCACTTACCGCAAGGGATGCAAGCCTTTAGAGCGCATGGACATAGTTGGTGGATCAGCAGCAGCAAGTCCTTGCTCATCCTACCATCCAAGTCCATGTGCTTCCTACAATCCAAGTCCAGGCTCATCTTCCTTCCCAAGCCCATCTTCATCTCCATACACCAACATTCCTAATGCTGATGGCAATTCTCTCATTCCATGGCTCAAAAACCTCTCAACTGCTTCATCTTCTGCATCGTCTCCAAAACTTCCCCATCTCTACCTCCACAGTGGCTCCATCAGTGCTCCTGTCACACCTCCTCTGAGCTCTCCAACGGCCAGAACACCACGAATCAACGCTGAGTGGGAGGATCAGTCTGTTCGGCCGGGGTGGACCAGACAGCAGCACTACTCATTCCTGCCATCTTCTAGTCCTCCGAGCCCCGGGCGCCAAGTTGTTGACCCGGAATGGTTTGCTGGGATCAAACTTCCTCATGTTAATCCAACCTCACCAACGTTCAGCTTGATCTCCTCAAACCCTTTTGCCTTCAAGGAAGATGGTTTGGCCGGCAGTGGTTCAAGAATGTGGACTCCTGCTCACAGTGGAACATGCTCTCCAGCTGTTGCACCAGGAACTGATCACAATGCTGACATTCCAATGTCTGAAGCTGTTTCAGATGAATTTGCATTTGGAAGCAACATGCTGGGGCTTGTGAAGCCATGGGAAGGAGAAAGGATTCATGAGGAATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGGTACCACCTATTTCACCATATAAATTGA 1002 0.497 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSAAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTNIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINAEWEDQSVRPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVNPTSPTFSLISSNPFAFKEDGLAGSGSRMWTPAHSGTCSPAVAPGTDHNADIPMSEAVSDEFAFGSNMLGLVKPWEGERIHEEFGSDDLELTLGNSKTRYHLFHHIN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01913 333 MobiDBLite consensus disorder prediction 1 20 - -
Vimu4g01913 333 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Vimu4g01913 333 MobiDBLite consensus disorder prediction 103 123 - -
Vimu4g01913 333 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 326 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01913 Vimu-Chr4 21067800 21071180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01913 1 325 BZR Transcription Factor Family AT1G78700 70.448 1.72e-140 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Vimu4g01913 BES1_N 2.5e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01913 - - gmx:100795369 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01913 4 21067800 21071180 Vimu4g01913 4 21067800 21071180 ECH