Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01867 ATGGTCACTTCTTTCGCCAACTTTCACAGATTTTGGTTTGTGCAGTTGAAGGTCATGGTGAAGGATCTGAAGGATGACCACACTGTAGAAGCCATGGAAAGGGTCATGAGACAGCACCAAGAATACTTCGTAGAAAAATGGGAGGAGGTGGAGAGGGATCCTCTCAGCGTATTCCTTGCGCCATGGACCACCACCCTTGAGCGCTCCCTCCACTGGATCACTGGCTGGCGCCCCACCACCATCTTCCACCTCATCTACACCGAGTCTGCCCTCCTCTTTGAGACTCACATCATCGATATCCTCTATGGCATCCGTACTGGAGACCTCGGCGACCTCAGCTCCTCCCAGTTTCGTCTCATGAGCGAACTCCAGTGTGAAACTGTGAAAGAGGAGAATGAGATAACGGAAGAGCTAGCAGAGTGGCAGGAGAGTGCAAGCGAGATGATGAGTCGTGAGATGGATATGAGTGAGAAGATCAGAGAGCTGATACCCATCATAAAAAAAGCAGATGATCTACGGATGAAAACATTGAAGGGCGTGGTGAGGTTGCTGTCAAAACAGCAGGCTATGGAATTCTTGATTGCCTCAGGAGAGTTGCTCTTTGGGATTCGCAGCTGGGGAATGACTCACGACGCGTCCACTTCATAA 648 0.5031 MVTSFANFHRFWFVQLKVMVKDLKDDHTVEAMERVMRQHQEYFVEKWEEVERDPLSVFLAPWTTTLERSLHWITGWRPTTIFHLIYTESALLFETHIIDILYGIRTGDLGDLSSSQFRLMSELQCETVKEENEITEELAEWQESASEMMSREMDMSEKIRELIPIIKKADDLRMKTLKGVVRLLSKQQAMEFLIASGELLFGIRSWGMTHDASTS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01867 215 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 4 212 - -
Vimu4g01867 215 Coils Coil 120 140 - -
Vimu4g01867 215 ProSiteProfiles DOG1 domain profile. 2 213 IPR025422 GO:0006351|GO:0043565
Vimu4g01867 215 Pfam Seed dormancy control 24 87 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01867 Vimu-Chr4 20451590 20452873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01867 32 214 Calmodulin-binding Proteins AT5G65210 23.529 3.49e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01867 - - pvu:PHAVU_005G081900g 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01867 4 20451590 20452873 Vimu4g01867 4 20451590 20452873 ECH