Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01864 ATGGCATTGTTAGTGGTAGTTGAGATTGTGGTTATTATTATTCCGAGCAAGTTGCTCCACCATACACAGGTGCAGGTTCCTCATGAGTCCAACATTAATACATCTATCCGGATAGTTAGAGTACAAGTGGTGGTTTCTGGTCATTGTACTGCTGATTCTACTGTTGATTCCTTGAAGGTTCAAGTAGAACTTCATCCTGAGGACTGCATCGACCTCTGGCTCTGCTCTCACAAAACCTGCCCCGTTTGTCGCCGAGACCTTGACTCTCCCCCAGACGACCAACCTCTCAAACTTGGCGACGTTGTTGTTTCCTCAGCCAACGTCGAGATACGCGTTGATGTGAGAGAAGAAGAAGGCCTTGATTGTGGTCAACAACAACAACATGAACAACAAGAGGAACAAACTGAACCTGAACGTAGTCGTGGTCTACGACAGGAACATGAGATGGTTAATGTACACGAGGAACAAATGTTTGTACGGTCTCATTCCACCAGGAATTCCATAGTTATGATTAGACAAGAGGGGGATGATGAGGGAAAGAATGATGATGACAAGTACACGTTGAGATTGCCGGAGCATGTTTTGAGAGTGAACAGTAAACATAATTCTACGAGGAGTTGTGCGAGTTTTAAGGATATGACCAAGCTTGATGCTCCTCTACCTTGCAGTAATTGTGGGTTTGTTCAACCCCCATCACCCAGTTGCTCCTCCTCCCCAACTCATACTCAGAGACCTTAA 738 0.4539 MALLVVVEIVVIIIPSKLLHHTQVQVPHESNINTSIRIVRVQVVVSGHCTADSTVDSLKVQVELHPEDCIDLWLCSHKTCPVCRRDLDSPPDDQPLKLGDVVVSSANVEIRVDVREEEGLDCGQQQQHEQQEEQTEPERSRGLRQEHEMVNVHEEQMFVRSHSTRNSIVMIRQEGDDEGKNDDDKYTLRLPEHVLRVNSKHNSTRSCASFKDMTKLDAPLPCSNCGFVQPPSPSCSSSPTHTQRP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01864 245 MobiDBLite consensus disorder prediction 227 245 - -
Vimu4g01864 245 SUPERFAMILY RING/U-box 68 97 - -
Vimu4g01864 245 MobiDBLite consensus disorder prediction 226 245 - -
Vimu4g01864 245 MobiDBLite consensus disorder prediction 118 144 - -
Vimu4g01864 245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 144 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01864 Vimu-Chr4 20437567 20439161 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01864 65 218 C3H Transcription Factor Family AT2G35420 25.641 5.92e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01864 - - vum:124822565 310.071