Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01847 ATGGGTCCCACTCCCAATCACTGTCCTAAAAAGAGAGAACCCTGCCACCGGCAAAACCAGTGGAGCACTCAAGCTACTGAATCAGCAATGGCTAACTTCTCCGAGGAACGCGAGAACTTTGTATATGTTGCAAAGTTAGCTGAACAAGCTGAACGATATGATGCATCTTCTGCAGCTACCCGTCTTCTTGTTGTTGCATTAACTGCATTTGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAGCTGAGTGTGGAAGAGAGGAACTTGTTTTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGCGCATAAGGGATTATAGGCACAAGGTCGAGTTGGAGCTGTCTAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGTATGCTTTGTGGTCTTCTTCTTTGAAAGGAGACTATTACCGGTATTTGGCAGAATTCAAAGCTGGTGATGAAAAGAATGAGGTAGCAGATCAGTCACTTAAAGCATATCAGGTATTTTCTGGAGGTGGCAAGACAGCTGCTACCACTGCTGAGAGTGAATTACAATCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTATTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCTAAGCAAGCGTTTGATGATGCTGTCTCAGAGCTAGATTCTCTGAATGAGGAATCTTACAAGGACGGTACCTTGATCTTGCAGCTGTTGAGGGATAACCTTACTTTATGGACTTCTGATATCCCTGAAGAGGGTGGTAACATATAG 921 0.4289 MGPTPNHCPKKREPCHRQNQWSTQATESAMANFSEERENFVYVAKLAEQAERYDASSAATRLLVVALTAFEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIRDYRHKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMYALWSSSLKGDYYRYLAEFKAGDEKNEVADQSLKAYQVFSGGGKTAATTAESELQSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDSLNEESYKDGTLILQLLRDNLTLWTSDIPEEGGNI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01847 306 Pfam 14-3-3 protein 70 296 IPR023410 -
Vimu4g01847 306 ProSitePatterns 14-3-3 proteins signature 2. 278 297 IPR023409 -
Vimu4g01847 306 SUPERFAMILY 14-3-3 protein 36 298 IPR036815 -
Vimu4g01847 306 PANTHER 14-3-3 PROTEIN 37 299 IPR000308 -
Vimu4g01847 306 SMART 1433_4 37 305 IPR023410 -
Vimu4g01847 306 MobiDBLite consensus disorder prediction 1 29 - -
Vimu4g01847 306 Gene3D - 15 304 IPR036815 -
Vimu4g01847 306 PRINTS 14-3-3 protein zeta signature 242 268 IPR000308 -
Vimu4g01847 306 PRINTS 14-3-3 protein zeta signature 85 114 IPR000308 -
Vimu4g01847 306 PRINTS 14-3-3 protein zeta signature 269 298 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01847 Vimu-Chr4 20270737 20273290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01847 35 305 14-3-3 family AT2G42590 69.004 2.25e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01847 K06630 - gmx:547574 434.106