Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01830 ATGCAAGTCTTTCTCTCTCTTTTAATGTGCTGTATTCCAATGTACCACGTCTCTTATCATTACAACCCACCACCACTCTTCATCCTCTTCAAGCAAACCCATTCTGTGCCTCTCTTTTCTTCTCTCATCCTGGTACAGGCTACTGATGAAAATTCAGATGAATGTTCAAACATGAAGGAAAGTATTCGTGAAGAGTCAAGTGGCATTCCCAATGAAGGTTTGATGATGGATCGGACAGTTCCGTCAAAACTGATGGACGATGTGGCAGCTACTAGGATTCAAAATGCATTCCGTTCATTTATGGCAAGAAGAACATTACATCATCTAAGGGGAGCAGTGAAATTCGAAGCTTTAATTCAAGATCACCTGGCCAGAGAGCAAACAGCAACTGCACTTAACTATATACATTCATGGAGCAGAATACAAGAACAAATTAGAGCTCGAAGAATCTGTATGATAACAGAAGCCAGAATTAAGAAAAAGAAATTGGAAAGCCAGTTAAAACTTGAGGCTAAGATTCAGGAGCTTGAGGTGGAGTGGTGCAGTGGTTCTGAAACCATGGAAGAGATACTTTGCAGGTTACATCAGCGAGAGGAAGCAGCAATTAAACGAGAGAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGCCAAACTGTAGCCAGTATTTTGGTCAGGCTTCTTATAGCCTTGGTAAAGAAAGTTGGGGTTGGAGCTGGACAGAGCGTTGGGTCGCGGCACGTCCTTGGGAAGTACAGGTTCGAGTTCAGCCCTCCAAAACAAAGAAACTTAATGGCCATGATCAAAAAATCAAATTCAACAAGATGAACTACAGTGAAAGCAAAGCAGTCTTGGCTAAACCTTCCCTGTCAAACGGGAAGGAAACTGGAAAAGGAAAGGAAAACAGTACTTCAGGGCAGTCAAAGAACATCGTTACCAAATAG 945 0.4265 MQVFLSLLMCCIPMYHVSYHYNPPPLFILFKQTHSVPLFSSLILVQATDENSDECSNMKESIREESSGIPNEGLMMDRTVPSKLMDDVAATRIQNAFRSFMARRTLHHLRGAVKFEALIQDHLAREQTATALNYIHSWSRIQEQIRARRICMITEARIKKKKLESQLKLEAKIQELEVEWCSGSETMEEILCRLHQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEVQVRVQPSKTKKLNGHDQKIKFNKMNYSESKAVLAKPSLSNGKETGKGKENSTSGQSKNIVTK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01830 314 PANTHER IQ-DOMAIN 5-RELATED 72 283 - -
Vimu4g01830 314 Coils Coil 159 179 - -
Vimu4g01830 314 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Vimu4g01830 314 MobiDBLite consensus disorder prediction 284 314 - -
Vimu4g01830 314 MobiDBLite consensus disorder prediction 295 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01830 Vimu-Chr4 19976807 19980265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01830 38 299 IQD Protein Family AT3G15050 49.049 4.55e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01830 - - gsj:114375165 487.263