Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01813 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTTCTCACCAAAGAGTGCCCACAATGGCCAACTTCACCCCCACAACCTCATCCACCACCACCACCACCGTCGCCGCCGCCTCCACCACCACTGCCCCCTCCCAACCCTCATGGGTCGACGAATTCCTCGACTTCTCCTCGACCCGGCGGGGGGCTCACCGGCGATCCGCCAGCGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCTGATGACATTGCAGCAGTGGCACTCCCGCCGCCACCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGACGTTGGACCTCAAGCCGAAGACGGAAAAGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAACTCTCCGCCACTACCACCTCCCCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGGTTAGGCTAA 570 0.5877 MAQLPPKIPTIPQNWPSFSHQRVPTMANFTPTTSSTTTTTVAAASTTTAPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAVALPPPPLSSASNPSSPSSDQNSNNEEKPMAMTLDLKPKTEKVEEESSCKNEAAALQLSATTTSPETVVDPKRVKRLG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01813 189 MobiDBLite consensus disorder prediction 114 189 - -
Vimu4g01813 189 PANTHER BASIC LEUCINE ZIPPER 34 1 187 - -
Vimu4g01813 189 MobiDBLite consensus disorder prediction 143 160 - -
Vimu4g01813 189 MobiDBLite consensus disorder prediction 163 179 - -
Vimu4g01813 189 MobiDBLite consensus disorder prediction 124 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01813 Vimu-Chr4 19778114 19778683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01813 1 188 bZIP Transcription Factor Family AT3G58120 39.640 3.10e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01813 - - gmx:100820197 238.039