Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01809 ATGTCTGGGAACTTCCGAGATCCTCAGAAATATTCTGGGAAGTTCTTGTTGTATCCTGGGAGACTTGCGCAATGCACTGCGGATAAGTCCTTAAGGACAGTGACTCTACACACCTTAGGAAATTTTGTTCAAGTCACATTTATCTTTTGTAAGTGTCAAGCTAAAATCCACCACGAGAAGTTTGGAAGGGTTAATAATCCCGAAAATGGGAAAGGAGAGGTTAATATTGATATGATGAGCCTTACAAATTCTAATGGATATGGTGGCGTCCCGAGCGAGTTGCATAGCCAGGGCAGTGAGTGTAGTGACATTCATTTTTTTGAGGGTGGACATGCTATTATTTCAATTCAGGTTCTTCAACAAGTAACGAATAATTTTAGTGAGAAAAACATTTTAGGTAGTAGAGGGTTTGAGGTTGTTTATAAAGGGGAATTGCATGATGGAAGTAAAATTTCTGTGAAGAGAATGAAATTTGTTGTAACAGGGAGCAAGGAATTGAATGAGTTCCAAGAAGATATTGCAGTTCTTACCAAGTTGGTGAGTCCTATGCATTTTGAGCAAGCATTTGTACTCGTGCGAAAGGGGAGTGGGAAATTTGCAGAAGTGAAAGAATTCAAAAATTTGGAGAGAAATTTAAGAAGAAATTCTAGTTACAAAGAGGGTAGAGATTTTGGAAGGATTCCGAGAACAACCATTTATCAAGAAACTAAGTCTGGAATAAAGGGTCCTGTTGTTGGTGGTTATCCTAATACTCTAATAATTATCCAGTCTCAACTAGAGAAGGATGTGTTATGTGATGAGAGCGGCTTGACTAATTGGGCTTTGTCTGAGGTTCTGGATGTGTCTAAGAACAGTTTATCAGGTCATATTCAAAAGTTCCCAACTAAGGTGATGTTGAACACTAATTATAATCCTTTTGTTCTGTATATTGAAGGTAGTGGTGGGAGTGGAACTCCTCCGTCAAGGGTTCTGGTGATGCACCAACCGGAAGTCCAAATGCACCATCAGCTGGTTTTTCACACTATTATGCTTGAATTGCAGCTTGAGGTTCTGGATGTGTCTAAGAACAATCTATCTGGTCATATTTCAAAGTTCCCAACCAAGATGATGTTAAACACTAATTATAATCCTTTTCTTTTGTATATTGAAGTTGGTGGTGGGAGTGGAACTACCCCGTCAAGCGGTTATGGTGATGCACCAACCGGAGGTCCAAATGCACCATTAGGTTGTTTTTCACTCTCTTATGCTTGGATTGCAGGCTTGACTAATTTGGCTCAGCTTGAGGTTCTGGATGTGTCTAAGAACAATATATCTGATCATATTCCAAAGTTCTCAACCAAGGTGATGTTGAACACTAATTATAGTCCTTGTCTTCTGTATATTGAATGTGGTAGTGGGAATGGAACTACTTCGTCAAGCGATTCTGGTGATGCACCAACCGGAAGTCCAAATGCACCATCAGACTTGACTAATTTGACTCAGCTTGATGTTCTGGATGTGTCTAAGAACAATCTATCTGATCATATTCCAAAGTTCTTAACCAAGGTTATGTTGAACACTATTTATAGTCCTTGTCTTCTGTATATTGAAGGTGGTAGTGGGAGTGGAACTACTCCGTCAAGCGGTTCTGGTGATGCACCAACTGGAAGTCCAAATGCACCATCAGGTGGTTTTTCACTCTCTTATGCTTGGATTGTACGGTTTTCACTCTCTTATGCTTGGTTTGTCACTCTCAACATGTTTGGGAGATGA 1752 0.3995 MSGNFRDPQKYSGKFLLYPGRLAQCTADKSLRTVTLHTLGNFVQVTFIFCKCQAKIHHEKFGRVNNPENGKGEVNIDMMSLTNSNGYGGVPSELHSQGSECSDIHFFEGGHAIISIQVLQQVTNNFSEKNILGSRGFEVVYKGELHDGSKISVKRMKFVVTGSKELNEFQEDIAVLTKLVSPMHFEQAFVLVRKGSGKFAEVKEFKNLERNLRRNSSYKEGRDFGRIPRTTIYQETKSGIKGPVVGGYPNTLIIIQSQLEKDVLCDESGLTNWALSEVLDVSKNSLSGHIQKFPTKVMLNTNYNPFVLYIEGSGGSGTPPSRVLVMHQPEVQMHHQLVFHTIMLELQLEVLDVSKNNLSGHISKFPTKMMLNTNYNPFLLYIEVGGGSGTTPSSGYGDAPTGGPNAPLGCFSLSYAWIAGLTNLAQLEVLDVSKNNISDHIPKFSTKVMLNTNYSPCLLYIECGSGNGTTSSSDSGDAPTGSPNAPSDLTNLTQLDVLDVSKNNLSDHIPKFLTKVMLNTIYSPCLLYIEGGSGSGTTPSSGSGDAPTGSPNAPSGGFSLSYAWIVRFSLSYAWFVTLNMFGR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01809 583 SUPERFAMILY RNI-like 344 514 - -
Vimu4g01809 583 PANTHER OSJNBA0070M12.3 PROTEIN 42 179 - -
Vimu4g01809 583 Gene3D Ribonuclease Inhibitor 266 464 IPR032675 -
Vimu4g01809 583 Gene3D Ribonuclease Inhibitor 471 526 IPR032675 -
Vimu4g01809 583 Gene3D Phosphorylase Kinase; domain 1 90 183 - -
Vimu4g01809 583 SUPERFAMILY Protein kinase-like (PK-like) 102 179 IPR011009 -
Vimu4g01809 583 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01809 Vimu-Chr4 19723993 19731444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01809 102 179 Trihelix Transcription Factor Family AT5G38560 38.462 3.41e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01809 K00924 - gmx:100781851 214.542