Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01756 ATGAAGGAGAATAATGAGGAGGCGTTTTTTGGGTATGAGAGAAAAGACAGGGTGACCCTCACTGATCCTGAGCTAATCAAAGATGTACTCAACAAGTCTAATGACTTCGAAAAGATTAATTTGAATCCACAATTCAGGTTACTAGCTCCTGGCCTTGTAAGACTCGAGGGAGAAAAGTGGAGCAAGCACAGAAAAATAATCAATCCTGCTTTTAACTTAGAGAAGTTGAAGGATATGTTACCACTATTCATCAAATGTTGTGATGATCTGATTAGCAAATGGGAGGAAATGTTGTCTTTGGATGGATCAAGTGAAATAGACGTATGGCCTTTCCTTCAGACTTTGGCTAGTGACGCAATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGACGAAGAATATTTCAACTTCTAAAAGAGCAAACTCAGCTAACAGTGCAAATTATGTTGAAAGTTTACATCCCTGGATGGAGGTTTGTACCCACTGCTACCCATAGAAGGATGAAGGCAATTGACAGGGAAATAAATGCTTCGCTTATGGATATTATTAATAACAGAGAGAAAGCATTAAAGGAGGGTGAAGCCACTAAACATGACTTGTTAGATATACTTCTCGAGTCAAATCACAAGGAAATTCAAGAACATGGAAACAATAAGAATGTTGGAATGAATATTGAAGATGTTATTGCGGAATGCAAATTATTTTACTTTGCAGGGCAGGAGACCACTTCATCTTTGCTCGTTTGGACAATGATATTATTGAGTATGTACCCTGATTGGCAAAGACGTGCAAGGGAGGAAGTCTTACAAGTTTTTGGCAAACAAAATCCAGATTTTGATGGACTGAATCACCTTAAGATTGTTACCATGATTTTGAATGAGGTTCTCAGGCTTTACTCACCAGTAATTGGTCTTGCTCGGAAAGTTCGTAAAGATGTGAAACTTGGAAATCTATCATTAGTCGCAGGAATGCAACTTTCTATACCAACAATTTTGGTTCATCATGATTGTGAGCTCTGGGGTGATGATGCTAAAGAGTTCAAACCTGAGAGATTTGCTGAAGGAGTTCTAAAGGCCACAAATGGCAGAGCTTCACTGATTCCCTTTGGAGGTGGTCCTAGGATTTGCATTGGACAAAACTTCTCCTTGTTGGAAGCAAAGATTGCTTTGTCAATGATTTTACAACGTTTCTCGTTTGAACTCTCTTCAACCTATACTCATGCTCCAACTACTGTGATTACTCTTCAACCCCAATATGGTGCTCATCTCATTCTTCGTAAAGTGGAAATATAA 1296 0.3873 MKENNEEAFFGYERKDRVTLTDPELIKDVLNKSNDFEKINLNPQFRLLAPGLVRLEGEKWSKHRKIINPAFNLEKLKDMLPLFIKCCDDLISKWEEMLSLDGSSEIDVWPFLQTLASDAISRTAFGSSYEEGRRIFQLLKEQTQLTVQIMLKVYIPGWRFVPTATHRRMKAIDREINASLMDIINNREKALKEGEATKHDLLDILLESNHKEIQEHGNNKNVGMNIEDVIAECKLFYFAGQETTSSLLVWTMILLSMYPDWQRRAREEVLQVFGKQNPDFDGLNHLKIVTMILNEVLRLYSPVIGLARKVRKDVKLGNLSLVAGMQLSIPTILVHHDCELWGDDAKEFKPERFAEGVLKATNGRASLIPFGGGPRICIGQNFSLLEAKIALSMILQRFSFELSSTYTHAPTTVITLQPQYGAHLILRKVEI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01756 431 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 422 - -
Vimu4g01756 431 Pfam Cytochrome P450 14 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 CDD CYP72 9 425 - -
Vimu4g01756 431 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS P450 superfamily signature 291 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS P450 superfamily signature 368 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS E-class P450 group I signature 115 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS E-class P450 group I signature 248 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS E-class P450 group I signature 377 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS E-class P450 group I signature 367 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 PRINTS E-class P450 group I signature 228 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 Gene3D Cytochrome P450 9 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01756 431 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 370 379 IPR017972 GO:0005506|GO:0016705
Vimu4g01756 431 SUPERFAMILY Cytochrome P450 15 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01756 Vimu-Chr4 19154359 19156829 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01756 18 429 Cytochrome P450 AT3G14610 59.420 6.22e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01756 - K23809 gmx:100782998 701.049