Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu4g01727 | ATGAGGCCGATTTTGATGAAGGGCCACGAGAGGCCACTCACGTTCCTTAAGTACAACAGGGACGACGATCTCCTCTTCTCCTGCGCCAAGGACCACAACCCTACGGTCTGGTTCGCCGACAATGGTGAATGCCTCGACACTTATCGCGCCACAACAGCGTTGTTTGGTGCTGCGACGTCTCAAGCAAGAGATTCTGGTCGACTCATAACGGGGAGTGCGGATCAGACCGCGAAGCTATGGAACGTGCAGTCTGGTCAGCAGTTGTTCACCTTCAATTTTGATTCTCCGGCCCGGTCTGTCGATTTTTCTGTCGGGGATAAGCTCACTGTCATTACCACTGATCCTTTTATGGAATTGCCCTCTGCAATCCATGTCAAGCGCATTGCAAAAGATCCCTCCGAACATAACATTTTCCCCCTTGCTTATCTATTGTCT | 435 | 0.5103 | MRPILMKGHERPLTFLKYNRDDDLLFSCAKDHNPTVWFADNGECLDTYRATTALFGAATSQARDSGRLITGSADQTAKLWNVQSGQQLFTFNFDSPARSVDFSVGDKLTVITTDPFMELPSAIHVKRIAKDPSEHNIFPLAYLLS | 145 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu4g01727 | 145 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 6 | 47 | IPR001680 | GO:0005515 | |
Vimu4g01727 | 145 | Gene3D | - | 1 | 142 | IPR015943 | GO:0005515 | |
Vimu4g01727 | 145 | SUPERFAMILY | WD40 repeat-like | 4 | 111 | IPR036322 | GO:0005515 | |
Vimu4g01727 | 145 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 64 | 90 | IPR001680 | GO:0005515 | |
Vimu4g01727 | 145 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I | 1 | 132 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu4g01727 | Vimu-Chr4 | 18758572 | 18759076 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu4g01727 | 1 | 136 | Eukaryotic Initiation Factors Gene Family | AT2G46280 | 69.118 | 5.62e-66 | 199 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu4g01727 | K03246 | - | gmx:100793485 | 228.794 |