Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01726 ATGAAGCAACTCATCCGTCGCCTCTCGCGCGTAGCTCACTCCTCAAATTACACGCTCCTCCGCTCCGACTCCTCCTCGTCGCGGGGCTGCCGCCGCCGCCACCGTTCGGAGTCCTTCCGCGCCTCCAAGATCCGCCGCTCTTCCGCAGTGGTTCCGGAGGGGCACGTCCCGATCTACGTCGGCGAAGAGATGGAAAGGTTTGTGGTTTGCGCTGAACTCCTCAACCATCCTGTCTTCGTTCAACTACTCAACGAATCCGCGCAGGAATACGGCTACGAGCAGAAAGGCGTGCTCCGGTTGCCATGCCGCGTCTTCGATTTCGAGCGCGTGCTCCACGCGCTCCGCCTTGGCCTCGACGCGCCTGATGTCTCCGAGCTCGTTAACTTCTTGCCGGAAGAATTATCCTGA 408 0.6078 MKQLIRRLSRVAHSSNYTLLRSDSSSSRGCRRRHRSESFRASKIRRSSAVVPEGHVPIYVGEEMERFVVCAELLNHPVFVQLLNESAQEYGYEQKGVLRLPCRVFDFERVLHALRLGLDAPDVSELVNFLPEELS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01726 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 111 IPR003676 GO:0009733
Vimu4g01726 135 Pfam Auxin responsive protein 7 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01726 Vimu-Chr4 18755902 18757383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01726 47 114 Calmodulin-binding Proteins AT4G31320 38.235 4.63e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01726 K14488 - gmx:100793103 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01726 4 18755902 18757383 Vimu4g01726 4 18755902 18757383 ECH