Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01718 ATGGCAGACGAGGTTGTTCTGTTGGATGCATGGTTCAGCATGTTTGGGATGCGGGTTAGAATTGCATTGGCAGAAAAGGGTGTTAAGTACGAACGAAAGGAAGAGGATCTGAGAAACAAGAGCGCTTTACTTCTGCAGATGAACCCTATTCACAAGAAGATTCCAGTTCTCATCCATAATGGGAAACCCATCTGTGAATCTGCAATAATAGTGCAGTACATCGATGAGCTCTGGAACCACAACCCTCAACTCATGCCCTCTCACCCATATGAAAGAGCTCAAGCCAGATTCTGGATGGATTACATTGACAAAAAGGTGTATGATACATGGAGGAAAATGTGGCTTTCTAGTGGAGAGGAGCATGAGACATGGAAGAAGGAGTTGATCTCTATCTTTAAGCAACTGGAAGAGACACTTGGTAACAAACCTTTTTTCGGGGGTGACATTTTTGGCTTTGTTGATGTTGGTCTGATCCCCTATTATAGTTGGTTTTATACGTATGAGACATATGGTAACTTCAAAATGGAAGCAGAATGTCCTAAACTCATAGCTTGGGCCAAGAGATGCATAGAGAGAGAGACCGTGTCCAAAACACTTGCTGATGAAAAGAAGGTGTATGCTTTCATCGACGGAATAAAGAAAGAACTTTATTCAAAATAG 660 0.4197 MADEVVLLDAWFSMFGMRVRIALAEKGVKYERKEEDLRNKSALLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDELWNHNPQLMPSHPYERAQARFWMDYIDKKVYDTWRKMWLSSGEEHETWKKELISIFKQLEETLGNKPFFGGDIFGFVDVGLIPYYSWFYTYETYGNFKMEAECPKLIAWAKRCIERETVSKTLADEKKVYAFIDGIKKELYSK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01718 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Vimu4g01718 219 FunFam Tau class glutathione S-transferase 1 87 - -
Vimu4g01718 219 CDD GST_C_Tau 89 209 IPR045074 GO:0004364|GO:0006749
Vimu4g01718 219 FunFam Glutathione S-transferase U20 88 219 - -
Vimu4g01718 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Vimu4g01718 219 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Vimu4g01718 219 Gene3D Glutaredoxin 1 87 - -
Vimu4g01718 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 206 IPR045073 -
Vimu4g01718 219 Gene3D - 88 218 - -
Vimu4g01718 219 CDD GST_N_Tau 5 78 - -
Vimu4g01718 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vimu4g01718 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Vimu4g01718 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vimu4g01718 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Vimu4g01718 219 SUPERFAMILY GST C-terminal domain-like 76 211 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01718 Vimu-Chr4 18682841 18684165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01718 1 216 Glutathione S-transferase Gene Family AT1G78380 62.500 1.36e-102 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01718 K00799 - gmx:106796199 375.941