Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01715 ATGGACGAGGGTGTTAAGTATGAACGCAAGGAAGAGGATCTGAGCAACAAGAGCCCTTTGCTTCTGCAGATGAACCCTATTCACAAGAAAATTCCAGTTCTCATTCATAATGGAAAACCCATTTGTGAATCTGCAATAATAGTGCAGTACATCGATGAGGTCTGGAATCAAAACCCTCCACTTATGCCCTCTGATCCTTATGAGAGAGCTCAAGCCAGATTCTGGGTCGATTACATTGATGAAAAGGTGTATCCTACTTGGAATAAAATGTGGCTTTCTAAAGGAGAAGAACATGAGGCAGGAAAAAGAGAGTTGATTTCTATCTTTAAGCAGTTGGAAGAGACATTGGGTGACAAACCTTTTTATGGAAATGAGAAGTTTGGCTTTGTTGATATTGCTCTTATCCCTTTCTACAGTTGGTTTTATACTTTTGAGACATATGGCAACTTTCAAATGGAAGCACAATGTCCTAAACTTGTGGCTTGGGCTAAAAGATGCATGCAGAGAAACACTGTGTCCACCATTCTTCCTAATCAGAACCAACTTTACATTGCAGTTGTGGAAATGGAGAAGAATTTACAAACTTAA 588 0.3946 MDEGVKYERKEEDLSNKSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNQNPPLMPSDPYERAQARFWVDYIDEKVYPTWNKMWLSKGEEHEAGKRELISIFKQLEETLGDKPFYGNEKFGFVDIALIPFYSWFYTFETYGNFQMEAQCPKLVAWAKRCMQRNTVSTILPNQNQLYIAVVEMEKNLQT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01715 195 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 59 IPR004045 -
Vimu4g01715 195 CDD GST_C_Tau 66 189 IPR045074 GO:0004364|GO:0006749
Vimu4g01715 195 Gene3D - 65 195 - -
Vimu4g01715 195 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 65 184 IPR010987 -
Vimu4g01715 195 SFLD Main (cytGST) 4 193 - -
Vimu4g01715 195 SUPERFAMILY Thioredoxin-like 4 59 IPR036249 -
Vimu4g01715 195 Pfam Glutathione S-transferase, C-terminal domain 99 165 - -
Vimu4g01715 195 SUPERFAMILY GST C-terminal domain-like 53 184 IPR036282 -
Vimu4g01715 195 FunFam Glutathione S-transferase U20 65 195 - -
Vimu4g01715 195 Gene3D Glutaredoxin 2 64 - -
Vimu4g01715 195 SFLD Main.3: Omega- and Tau-like 4 193 IPR045073 -
Vimu4g01715 195 CDD GST_N_Tau 4 55 - -
Vimu4g01715 195 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 182 IPR045073 -
Vimu4g01715 195 Pfam Glutathione S-transferase, N-terminal domain 4 53 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01715 Vimu-Chr4 18653103 18654648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01715 2 193 Glutathione S-transferase Gene Family AT1G17180 58.333 7.22e-87 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01715 K00799 - gmx:547950 326.635