Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu4g01701 | ATGGGAAAATCAACTCTCACCGATTCTCTTGTTGCTGCTGCTGGAATTATTGCTCAAGAGGTGGCAGGTGATGTCCGTATGACTGATACCCGTGCAGATGAAGCTGAGCGTGGTATCACAATCAAGTCTACGGGTATCTCACTCTATTACGAGATGACTGATGAATCTCTCAAGAATTATAAGGGGGAGCGTAATGGGAATGAGTATCTCATTAATCTTATTGACTCCCCTGGACACGTTGACTTCTCATCTGAGGTTACTGCTGCACTCCGTATTACTGATGGAGCCCTAGTCGTGGTGGACTGTGTTGAAGGAGTCTGTGTCCAAACTGAAACTGTGCTACGTCAAGCTCTGGGAGAAAGGATTAGGCCTGTTCTGACTGTCAACAAGATGGACAGGTGCTTCCTTGAGCTCCAGGTGGATGGAGAGGAGGCTTACCAAACATTCCAGAGGGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGATCCACTTCTGGGTGATGTTCAGGTCTACCCAGAGAAAGGAACTGTTGCTTTCTCTGCAGGGTTACATGGGTGGGCTTTTACCTTGACGAACTTTGCCAAGATGTATGCTTCAAAGTTTGGAGTTGATGAAGGAAAGATGATGGAAAGGTTATGGGGTGAAAACTTCTTTGATCCAGCCACAAAGAAATGGACCAGCAAGAACACTGGATCTGCTACCTGCAAGCGTGGGTTTGTTCAGTTCTGCTATGAGCCCATCAAACAGATCATTAACACTTGCATGAATGATCAGAAGGATAAGCTGTGGCCTATGCTGCAAAAACTTGGTGTCACCATGAAATCTGAGGAGAAGGACCTCATGGGTAAAGCATTGATGAAGCGGGTGATGCAAACCTGGCTTCCAGCAAGTACTGCCCTATTGGAAATGATGATCTTTCATCTTCCCTCTCCATCAACTGCCCAGAAGTACCGTGTGGAAAATTTGTACGAGGGTCCTCTTGATGATCAATATGCTGCAGCTATCAGAGCCTGTGACCCTGATGGTCCTCTGATGCTTTATGTGTCAAAGATGATTCCAGCATCTGACAAGGGTAGATTCTTTGCTTTTGGACGTGTGTTCTCTGGCAGGGTGTCAACTGGTTTAAAGGTGAGGATCATGGGACCAAATTATGTTCCTGGAGAGAAAAAGGATTTGTATGTCAAGAGTGTTCAACGTACTGTCATTTGGATGGGTAAGAGACAGGAAACTGTTGAGGATGTGCCATGTGGTAACACAGTTGCTATGGTGGGTTTGGACCAATTTATCACTAAGAATGCTACATTGACGAATGAGAAGGAAGTTGATGCTCACCCTATTAGGGCCATGAAGTTTTCTGTCTCCCCAGTTGTGCGTGTTGCTGTTCAGTGCAAGGTTGCCTCAGATCTTCCCAAACTTGTTGAAGGTCTAAAGCGATTGGCCAAATCAGATCCTATGGTTGTTTGTACAATTGAAGAGTCCGGTGAGCACATTGTTGCTGGTGCCGGGGAACTTCATCTTGAGATCTGTTTGAAGGACTTGCAGGATGATTTTATGGGTGGAGCTGAGATCATTAAATCTGACCCTGTTGTGTCATTCAGGGAGACTGTCCTGGAGAGGTCATGCCGCACAGTAATGAGCAAGTCACCTAACAAGCACAACCGTCTGTACATGGAAGCAAGGCCAATGGAGGATGGTCTGGCTGAAGCCATTGATGATGGCAAGATTGGACCAAGGGATGACCCAAAGGTTCGTTCTAAGATCTTGTCTGAAGAGTTTGGCTGGGACAAGGATCTTGCTAAGAAGATTTGGTGTTTTGGCCCAGAGACCACTGGACCCAACATGGTGGTTGATATGTGTAAGGGAGTGCAATATCTGAATGAAATCAAGGATTCTGTGGTTGCTGGATTCCAGTGGGCATCAAAAGAAGGTGCATTGGCTGAGGAGAACATGAGAGCTATATGCTTTGAAGTATGTGATGTGGTCCTTCACGCTGATGCTATCCACAGAGGTGGTGGTCAGATCATTCCTACTGCGAGGAGAGTGTTCTATGCTTCACAGCTAACTGCTAAACCCAGGCTTCTTGAGCCTGTGTACCTGGTTGAAATCCAGGCACCTGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTGAATCAGAAACGTGGACACGTGTTTGAGGAAATGCAGAGGCCAGGTACCCCACTCTACAACATCAAGGCATATCTCCCTGTCATTGAGTCTTTTGGTTTCTCAAGCACGTTGAGGGCTGCAACATCAGGCCAAGCTTTCCCACAGTGTGTCTTTGATCATTGGGACATGATGTCCTCTGACCCATTGGAGGCTGGATCGCAAGCTGCACAACTTGTGGCGGATATTCGTAAGAGGAAGGGCTTGAAGGAACAGATGACTCCTCTCTCTGAGTATGAAGACAAGCTTTAA | 2445 | 0.4642 | MGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDESLKNYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEGKMMERLWGENFFDPATKKWTSKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASTALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYAAAIRACDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGKIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVVLHADAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEAGSQAAQLVADIRKRKGLKEQMTPLSEYEDKL | 814 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu4g01701 | 814 | SUPERFAMILY | EF-G C-terminal domain-like | 698 | 809 | IPR035647 | - | |
Vimu4g01701 | 814 | Gene3D | Translation factors | 314 | 455 | - | - | |
Vimu4g01701 | 814 | FunFam | Translation elongation factor 2 | 694 | 814 | - | - | |
Vimu4g01701 | 814 | FunFam | Translation elongation factor 2 | 540 | 693 | - | - | |
Vimu4g01701 | 814 | Gene3D | Yeast translation eEF2 (G' domain) | 193 | 297 | - | - | |
Vimu4g01701 | 814 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 2 | 813 | - | - | |
Vimu4g01701 | 814 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 533 | 697 | IPR020568 | - | |
Vimu4g01701 | 814 | FunFam | Translation elongation factor 2 | 1 | 208 | - | - | |
Vimu4g01701 | 814 | Gene3D | - | 541 | 693 | IPR014721 | - | |
Vimu4g01701 | 814 | CDD | eEF2_snRNP_like_C | 698 | 776 | - | - | |
Vimu4g01701 | 814 | Pfam | Elongation Factor G, domain III | 458 | 520 | IPR041095 | - | |
Vimu4g01701 | 814 | Pfam | Elongation factor Tu GTP binding domain | 2 | 313 | IPR000795 | GO:0003924|GO:0005525 | |
Vimu4g01701 | 814 | Pfam | Elongation factor Tu domain 2 | 365 | 438 | IPR004161 | GO:0005525 | |
Vimu4g01701 | 814 | CDD | EF2_II | 346 | 441 | - | - | |
Vimu4g01701 | 814 | FunFam | Translation elongation factor 2 | 314 | 455 | - | - | |
Vimu4g01701 | 814 | SMART | EFG_C_a | 695 | 784 | IPR000640 | - | |
Vimu4g01701 | 814 | Gene3D | - | 1 | 185 | IPR027417 | - | |
Vimu4g01701 | 814 | PRINTS | GTP-binding elongation factor signature | 72 | 82 | IPR000795 | GO:0003924|GO:0005525 | |
Vimu4g01701 | 814 | PRINTS | GTP-binding elongation factor signature | 88 | 99 | IPR000795 | GO:0003924|GO:0005525 | |
Vimu4g01701 | 814 | PRINTS | GTP-binding elongation factor signature | 36 | 44 | IPR000795 | GO:0003924|GO:0005525 | |
Vimu4g01701 | 814 | PRINTS | GTP-binding elongation factor signature | 124 | 133 | IPR000795 | GO:0003924|GO:0005525 | |
Vimu4g01701 | 814 | Pfam | Elongation factor G, domain IV | 581 | 693 | IPR005517 | GO:0005525 | |
Vimu4g01701 | 814 | SUPERFAMILY | Translation proteins | 313 | 447 | IPR009000 | - | |
Vimu4g01701 | 814 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 29 | 44 | IPR031157 | - | |
Vimu4g01701 | 814 | FunFam | Translation elongation factor 2 | 457 | 534 | - | - | |
Vimu4g01701 | 814 | CDD | EF2_snRNP_III | 458 | 530 | - | - | |
Vimu4g01701 | 814 | NCBIfam | small GTP-binding protein domain | 2 | 147 | IPR005225 | GO:0005525 | |
Vimu4g01701 | 814 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 457 | 534 | - | - | |
Vimu4g01701 | 814 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 1 | 315 | IPR000795 | GO:0003924|GO:0005525 | |
Vimu4g01701 | 814 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 312 | IPR027417 | - | |
Vimu4g01701 | 814 | SMART | EFG_IV_2 | 576 | 693 | IPR005517 | GO:0005525 | |
Vimu4g01701 | 814 | Pfam | Elongation factor G C-terminus | 695 | 782 | IPR000640 | - | |
Vimu4g01701 | 814 | CDD | aeEF2_snRNP_like_IV | 530 | 702 | - | - | |
Vimu4g01701 | 814 | Gene3D | - | 694 | 814 | - | - | |
Vimu4g01701 | 814 | SUPERFAMILY | EF-G C-terminal domain-like | 455 | 531 | IPR035647 | - | |
Vimu4g01701 | 814 | FunFam | Elongation factor 2 | 193 | 297 | - | - | |
Vimu4g01701 | 814 | CDD | EF2 | 2 | 201 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu4g01701 | Vimu-Chr4 | 18501608 | 18505392 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu4g01701 | 2 | 814 | Eukaryotic Initiation Factors Gene Family | AT1G56070 | 93.112 | 0.0 | 1595 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu4g01701 | K03234 | - | gmx:100804251 | 1607.42 |