Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01660 ATGACCGAAGAGGACAAGCCCGTAGCCTCCGTCGTCGGCCACCAGCACCACCACCATCACCACCACCCTCCGCCGCAGCCACTACCCGGTCCACCACCACAGTATGGCACCTTCCAAGGCGTCGCCAACTACCCTCCTCCGCCCGAGCCACATCCCGCTATTGGCTTTCCCCAACCCGTTCCACCGGCCGGCGCCGTCAACGCCGGTCCTCTTCCACCGTACTACCCGGGATACCAAGCTGTACCCGGTTACGCAGTTGCTGAAGGAAGACCTGTAAGAGAACGGCGCCTTGGTTGCTGTGGCCTTGGTTGTGGCTGGTGTCTGTTTATACTAGGCTTCTTTCTTCCTGCCATCCCATGGTACGTTGGGGCAATAATTATGCTGTGTTCCAGAGTAGACCATCGAGAGAAACCTGGATATGTTGCTTGTGTAGTTGCTGCTGTTCTGGGTACAATTGCGATTATTCTTGGTGTTGCAAAGGGAGCAGATGACTGGTAA 498 0.5663 MTEEDKPVASVVGHQHHHHHHHPPPQPLPGPPPQYGTFQGVANYPPPPEPHPAIGFPQPVPPAGAVNAGPLPPYYPGYQAVPGYAVAEGRPVRERRLGCCGLGCGWCLFILGFFLPAIPWYVGAIIMLCSRVDHREKPGYVACVVAAVLGTIAIILGVAKGADDW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01660 165 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 165 IPR044804 -
Vimu4g01660 165 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01660 Vimu-Chr4 17940026 17942535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01660 3 165 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.404 4.34e-26 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01660 - - gmx:100810998 213.001