Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01659 ATGGTGTTGTTAACTTTGAGAACTGAAACATGGTTCCTGATCTTGGTGCCTGTGGTGGTGCTATGGATGTGGAAATTACTGAACTGGGTATGGCTGAGGCCAAAGAGAATGGAGAAGATTCTGAGAGCACAGGGCCTTCAGGGAAACCCTTACAGGCTCTTGATTGGAGACACAAAGGAAATGTATACAGTGCTTGTGCAAGCTGCAAAATCTCAAAAATCCACCAGTTTTCTCTCCTCTGAGAACGACGTCGCACCGCATATCACAACCTTTAACCATCACATTGTACACAAATTTGGCAAAAAATCATTTACATGGGAAGGTCCTACACCAAAAGTTATTATCATGGATCCTGAGCAAATCAAAGACATCTTCAACAAGTTCCAGGATTTTGAGAAGCCTAAGTTGAGCCCCCTTTTCAAATTGTTGGGTACTGGACTTGCAAATTTAGAAGGAGAGAAATGGAAGATGCATCGAAAGATTATAAACCCTGCTTTCCATTTAGAAAAACTGAAGGTTATGTTACCAACATTTATGCAATGTTGCGATGACATGATTTCCAAATGGGAAGTGATGCTGTCTTCACAGGAGAAATGTGAAATTGACGTATGGCCTTTCCTTCAAAAATTGACCCGTGATATTATTTCTAGAACAGCATTTGGAAGCAGTTATGAAGAAGGTAGAGAAATATTTGAATTTCTGAAAGAGCAAACAGGACTTGTCATGAGATCACGGAAAGTTTACATTCCAGGGTCGTGGTTGTTACCAACAGCTAGAAATAGGAGGATGAAAGCAATTGATGCTCATATACGAAGATTACTTAAAGACATCATTAACAATCGAGAGAAAGCAATGAAGGACGGTGATGTTAACAGCCATGACTTATTGGGGATACTTTTGGAATCAAACCATGCGGAAATGCTAGAAAATAGAAACAGTAAAACCCTTCCAATGACTAGTCAAGATGTAATTGAGGAGTGCAATGCATTCTACATAGCAGGGCAAGAAACTTCAGCAGTTTTGCTGGTTTGGACAATGTTGTTGTTGAGTAGGCATCCTGAGTGGCAAGCACGTGCTAGAGAGGAAGTGTTGAATACTTTTGGTAACCAAAAGCCAGACTATAATGGATTAAGTCACCTCAAAGTTGTGACCATGATTTTGTACGAGGTTTTGAGGTTATATCCACCTGTAGTTTATTTCAGTCGAGGTATCAAGAATGATGTGAAACTTGGAGAGCTTTGTCTACCTGGAGGAGTGCAAATTTCCATACCAATATTGTTGGTTCACCAGGATCGTGATGTTTGGGGTGATGATGCCACTGAGTTCAAACCCGAAAGATTTGGTGAAGGAGTGGCAGCTGCAACAAAAGGCCAAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAGTGTGCATTGGCCAAAATTTTGCTCTATTAGAAGCAAAGCTGGTTTTGTCCTTACTTTTGCAACGTTTCTCGTTTGAGATTTCTCCAGCCTATGCTCATGCTCCAGTCACTTTGTTCACTCTTCATCCAAAACATGGAGCTCATGTCATCTTACACAAGCTCTAG 1572 0.4084 MVLLTLRTETWFLILVPVVVLWMWKLLNWVWLRPKRMEKILRAQGLQGNPYRLLIGDTKEMYTVLVQAAKSQKSTSFLSSENDVAPHITTFNHHIVHKFGKKSFTWEGPTPKVIIMDPEQIKDIFNKFQDFEKPKLSPLFKLLGTGLANLEGEKWKMHRKIINPAFHLEKLKVMLPTFMQCCDDMISKWEVMLSSQEKCEIDVWPFLQKLTRDIISRTAFGSSYEEGREIFEFLKEQTGLVMRSRKVYIPGSWLLPTARNRRMKAIDAHIRRLLKDIINNREKAMKDGDVNSHDLLGILLESNHAEMLENRNSKTLPMTSQDVIEECNAFYIAGQETSAVLLVWTMLLLSRHPEWQARAREEVLNTFGNQKPDYNGLSHLKVVTMILYEVLRLYPPVVYFSRGIKNDVKLGELCLPGGVQISIPILLVHQDRDVWGDDATEFKPERFGEGVAAATKGQVSFFPFGWGPRVCIGQNFALLEAKLVLSLLLQRFSFEISPAYAHAPVTLFTLHPKHGAHVILHKL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01659 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Vimu4g01659 523 CDD CYP72 91 519 - -
Vimu4g01659 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 SUPERFAMILY Cytochrome P450 87 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 516 - -
Vimu4g01659 523 Gene3D Cytochrome P450 30 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 Pfam Cytochrome P450 95 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01659 523 FunFam Cytochrome P450 734A1 31 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01659 Vimu-Chr4 17930382 17934469 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01659 14 523 Cytochrome P450 AT3G14690 53.320 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01659 - K17873 gmx:100781923 830.476