Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01657 ATGGAAGCAGCATGGGCAACAACAGTGACAATCATAGTGATACTTGTTCTGATATGGGCATGGAAGATTTTGAACTGGTTATGGTTCAAACCAAAGAGGCTTGAAAAGCTGCTAAGAGAGCAAGGCTTTCAAGGCAATCCGTACAAGCTTTTTGTTGGAGACAGCAAGGAGTTTCTCAAAATGAGAAAGGAAGCTTTGTCCAAACCCATGAATCTCTGTGATGACATAGCGCCACGTGTTTCTTCCTACATGCATCATATTGTCAACACACATGGTAAGAACTCTTTTATCTGGTTAGGACCAACTCCAAGGGTGACCATCTTAGATCCTGGGCAAATCAAAGATGTATTTAACAATATGTCTGACTTCCCAAAGCCTCACATAAATCCACTCTTCAAGTTACTAGCAACCGGCCTTGCCGACCATGATGGAGAAAAGTGGAGCAAGCACAGAAGTTTGAGTGACGTGATTCTAAATCCGAGTGATTTCCTTATTGCACCACAGACTATGTTACCATTATTCTTCGAAAGTTGCAATGATTTGGTTAGCAAATGGGAAGGAATGTTGTCATCAGACGGATCATGTGAAATAGATGCGTGGCCTTTCCTTCAGAATCTGGCTAGTGATGTTATTGCTCGCTCAGCATTTGGAAGTAGCTTTGAAGAAGGGAGAAGAATATTTCAACTTCAAAGAGAGCAAGCTAAACTTGTAATGCAACTTATATTAAAAATTCAAATCCCAGGATGGAGGTTTTTGCCTACTAAAAGCCATAGGAGAATGAAGGAAATTGACAGAGATATAAAAGCTTCGCTCAAGGATATGATTTACAAGAGGGAGAAAGCACTAAAGGCTGGTGAAGCCACTAATAATGACCTGTTGGGTATACTTTTGGAGTCCAATCACAAGGAGATTCAAGAACATGGAAACGGAGATAATAAGAATGTTGGAATGAGTCTTGAAGACGTAATCCAGGAATGCAAGCTATTTTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTGGTTTGGACAATGGTGTTATTGAGTAGGTACCCTAATTGGCAACAACGTGCAAGGGAGGAAGTCTTGCAAGTCTTTGGCAATGAAAAGCCAAGTTTTGATGGTTTAAATCGGTTAAAGATTGTCACTATGATTTTGAATGAGGTTCTTAGATTATACCCACCAGTAATTGGATTGGGTCGAGTTGTTAAAAGAGATCTGAAACTTGGAAAAGTAACATTACCTGCTGGAGTGCATGTTTTCCTCCCAACAGTTTTGGTTCACCACGACAGTGAATTTTGGGGTGAAGATGCTAAGCAGTTCAATCCAGAGAGATTTTCTGAGGGAGTTCTGAAAGCAACAAATGGTAAAGTTTCATTCTTTCCATTTGGAGGGGGTCCTAGAATTTGCATTGGACAAAACTTCTCCTTACTTGAAGCAAAGATGGCTTTGTCAATGATTTTACAGCATTTCTCATTTGAACTTTCTCCAGCATATACTCATGCTCCAACTATGTCAATCACTCTTCAGCCGCAAAAGACAGATATGGAAGCAGCATGTGCAACAGCTCTGACTCTCATAGTGATACTTGTTCTGATATGCGCATGGAGGATTCTGAACTGGTTATGGTTCAAACCAAAGAGACTTGAAAAGCTGCTAAGAGAGCAAGGCTTTCAAGGCAATCCATACAGGCTTTTGTTTGGAGATAGCAAGGACTTGCTCAAAACGAGAAAGAAAGCCTTATCCAAACCTATGAATCTCTCTGATAACATAATTCCACGTGTGTCTTCCTACACCCATCATACTGTCAACACACATGGTAAAAACTCTTTTATCTGGTTAGGACCAACTCCAAGGGTGACCATCTTAGATCCTGGGCAAATCAAAGATGTACTTAACAATATGTCTGACTTTCCAAAGCCTGACACAAATCCACTTGTCAAGTTACTAGCAACTGGCCTTGCCGATCATGATGGAGAAAAGTGGAGCAAGCACAGAAGGTTAATCAACCCTGCTTTCAATTTAGAAAAATTAAAGAGTGATTTCCTTATTGCACCACAGACTATGTTACCATTATTCTTCGAAAGTTGCAATGATCTGGTTAGCAAATGGGAAGGAATGTTGTCTTCAGACGGATCATGTGAAATAGATGCATGGCCTTTCCTTCAGAATCTGGCTAGTGATGTTATCGCTCGCTCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAGCTAAACTTGCATTGCAACTTGTATTAAAAATTCAAATCCCTGGATGGAGGTTTTTGCCTACTAAAAGCCATAGGAGAATGAAGGAAATTGACAGAGATATAAAAGCATCACTCAAGGATATGATTTACAAGAGGGAGAAAGCACTAAAGGCTGGTGAAGCCACTAATAATGACCTGTTGGGTATACTTTTGGAGTCCAATCACAAGGAAATTCAAGAACATGGAAATGGAGAAAATAAGAATGTTGGAATGAGTCTTGAAGACGTAATCCAGGAATGCAAGCTATTTTACTTTGCAGGGCAAGAAACCACTTCAGTTTTGCTGGTTTGGACAATGGTGTTATTGAGTAGATTATACCCACCGGTACTTGGGTTGACACGATTTGTTAAAAGAGATATGAAACTTGGAAACATAACATTGCCTGCTGGAGTGCAGGTTTTACTTCCGACAATTTTGGTTCACCATGGATGTGAATTCTGGGGTGAAGATGCTAAGCAGTTTAATCCTGAGAGATTTTCTGAAGGAGTTCTAAAGGCAACAAATGGTAGAGTTTCATTTTTCCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTCTCCTTGTTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAACATTTCTCATTTGAACTTTCTCCAGCATATGCTCATGCTCCAGCTATGTTAATCACTCTTCATCCACAGTATGGTGCTCATATCATTCTCCATAAAGTGAAATCTTAA 3009 0.3995 MEAAWATTVTIIVILVLIWAWKILNWLWFKPKRLEKLLREQGFQGNPYKLFVGDSKEFLKMRKEALSKPMNLCDDIAPRVSSYMHHIVNTHGKNSFIWLGPTPRVTILDPGQIKDVFNNMSDFPKPHINPLFKLLATGLADHDGEKWSKHRSLSDVILNPSDFLIAPQTMLPLFFESCNDLVSKWEGMLSSDGSCEIDAWPFLQNLASDVIARSAFGSSFEEGRRIFQLQREQAKLVMQLILKIQIPGWRFLPTKSHRRMKEIDRDIKASLKDMIYKREKALKAGEATNNDLLGILLESNHKEIQEHGNGDNKNVGMSLEDVIQECKLFYFAGQETTSVLLVWTMVLLSRYPNWQQRAREEVLQVFGNEKPSFDGLNRLKIVTMILNEVLRLYPPVIGLGRVVKRDLKLGKVTLPAGVHVFLPTVLVHHDSEFWGEDAKQFNPERFSEGVLKATNGKVSFFPFGGGPRICIGQNFSLLEAKMALSMILQHFSFELSPAYTHAPTMSITLQPQKTDMEAACATALTLIVILVLICAWRILNWLWFKPKRLEKLLREQGFQGNPYRLLFGDSKDLLKTRKKALSKPMNLSDNIIPRVSSYTHHTVNTHGKNSFIWLGPTPRVTILDPGQIKDVLNNMSDFPKPDTNPLVKLLATGLADHDGEKWSKHRRLINPAFNLEKLKSDFLIAPQTMLPLFFESCNDLVSKWEGMLSSDGSCEIDAWPFLQNLASDVIARSAFGSSFEEGRRIFQLQREQAKLALQLVLKIQIPGWRFLPTKSHRRMKEIDRDIKASLKDMIYKREKALKAGEATNNDLLGILLESNHKEIQEHGNGENKNVGMSLEDVIQECKLFYFAGQETTSVLLVWTMVLLSRLYPPVLGLTRFVKRDMKLGNITLPAGVQVLLPTILVHHGCEFWGEDAKQFNPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSMILQHFSFELSPAYAHAPAMLITLHPQYGAHIILHKVKS 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01657 1002 Pfam Cytochrome P450 869 976 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 Pfam Cytochrome P450 598 868 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 Pfam Cytochrome P450 81 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 SUPERFAMILY Cytochrome P450 80 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 Gene3D Cytochrome P450 869 1001 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 SUPERFAMILY Cytochrome P450 596 998 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 FunFam Cytochrome P450 734A1 28 516 - -
Vimu4g01657 1002 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 941 950 IPR017972 GO:0005506|GO:0016705
Vimu4g01657 1002 Gene3D Cytochrome P450 71 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 CDD CYP72 82 512 - -
Vimu4g01657 1002 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Vimu4g01657 1002 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 512 - -
Vimu4g01657 1002 Gene3D Cytochrome P450 560 868 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g01657 1002 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01657 Vimu-Chr4 17909024 17920969 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01657 6 512 Cytochrome P450 AT3G14690 54.921 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01657 - K23809 cmax:111477005 1061.6