Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01654 ATGGCTTCATTCAAAAGCAACAACATTGAAGCTCAAATACCAGAAGAGATTCTCATAGCTCAGGTTATGCAACTTCATGCAAGCATCTCAAAGCTTGAATCTCTTAGGCCTTGCAAGCAAGTGAATAGTCTCTTCACTCATCTGGTGAAACTTTGCACTCTCCCTTCATCCATTGACATTGAGGCCTTGCCTCAAGAGGTGCAAGAGATGCGTCAGAGTCTCATTAACCTTAGTGGCCATGCCGAGGGACTCTTAGAGCTTGAATTCTCAACCTTCATAAGCCTCACACCGGAGCCCTTCAAGAATGTGACCCTTTTCCCTTACTATGAGAACTATTTGAAACTAGCACACATGGAGAACAAAATCCTGAAAGAAAATGGGATTGTGAATGCAAAGAAAGTGGCTTTTGTGGGATCAGGTCCAATGCCACTCACTTCCATCATAATGGCCAGTCAGCACATGGAGTCCACACACTTTGACAACTTTGACAATGATGAGAAGGCAAACGAGGTGGCTCGAAAGATTGTTGCTTCCGATGCAGCACTTGAGAAGAGGATGAAGTTTGTGACACAAGACATCATGGAGGTGAGAGAGAGGTTGGGGCAATATGATTGCATCTTTTTGGCAGCACTGGTTGGCCTGAATAGGGAAGCAAAAGTGAAGATTTTGGGACACATAAGGAAGTATATGAAAGAGGAAGGAGTTTTGCTTGTGAGAAGTGCAAAAGGGTCAAGAGCTTTCTTGTATCCTGTTATTGAGGAACGTGACATGGTCAATTTTGAGGTTCTTACCATCTTTCACCCCACAAATGATGTCATCAATTCGGTTGTTCTTCTTCGCAAGCCTAAGGCTTAG 855 0.4374 MASFKSNNIEAQIPEEILIAQVMQLHASISKLESLRPCKQVNSLFTHLVKLCTLPSSIDIEALPQEVQEMRQSLINLSGHAEGLLELEFSTFISLTPEPFKNVTLFPYYENYLKLAHMENKILKENGIVNAKKVAFVGSGPMPLTSIIMASQHMESTHFDNFDNDEKANEVARKIVASDAALEKRMKFVTQDIMEVRERLGQYDCIFLAALVGLNREAKVKILGHIRKYMKEEGVLLVRSAKGSRAFLYPVIEERDMVNFEVLTIFHPTNDVINSVVLLRKPKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01654 284 PANTHER NICOTIANAMINE SYNTHASE 3 14 282 IPR004298 GO:0030410|GO:0030418
Vimu4g01654 284 CDD AdoMet_MTases 162 238 - -
Vimu4g01654 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 240 IPR029063 -
Vimu4g01654 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 284 IPR004298 GO:0030410|GO:0030418
Vimu4g01654 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Vimu4g01654 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01654 Vimu-Chr4 17878037 17879156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01654 15 281 Nicotianamine Synthase Gene Family AT1G56430 47.232 8.05e-88 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01654 K05953 - gmx:100819726 494.967