Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01646 ATGGTTATGGCCAATAGTGGCATAAACTTGGTGCTTCATCAAGGGTCAATGTTGCCACATGAACTTCCTGTAGCTGCTGTACTGGGACCTTCCTGCTTTCATTCGTTTTCTTCAACTTGGGCTATTACCAATGGAGCCATTCTTGCCTCACCACAAAGGGAGAACTGCAGTGGTACTTGTTATTGCTCAAGTTTCAGGAAATGTACGTGCAAATGGAAACGGCTTGTAAGAAGTTGCTCCACAAGTGAGTTTGTCATTGCCGGTGATGAAAACTATGGCAATAAGCAGGTTGTTAGTCTCACTCCCCGTCTCTACGACTATGTACTAAAAAATGTTCGAGAGCCAGAGATTCTAAGGCAATTGCGGCAGGAGACAGCCTCTATGCGTGGAAGTCAAATGCAGGTGTCCCCTGATCAGGCACAGCTGCTTGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGCGTTTATACAGGATACTCATCATTAGCCATAGCATTAGTTCTGCCAGATTCAGGTCATTTAGTTGCCTGTGAGAGAGATGCCAAATCTCTTGAAGTTGCCAAGAAGTATTATCATCTAGCTGGCGTTTCACATAAGGTATCTATGCTACTCATCTGCTTTTGA 639 0.446 MVMANSGINLVLHQGSMLPHELPVAAVLGPSCFHSFSSTWAITNGAILASPQRENCSGTCYCSSFRKCTCKWKRLVRSCSTSEFVIAGDENYGNKQVVSLTPRLYDYVLKNVREPEILRQLRQETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPDSGHLVACERDAKSLEVAKKYYHLAGVSHKVSMLLICF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01646 212 PANTHER O-METHYLTRANSFERASE-RELATED 94 207 - -
Vimu4g01646 212 Gene3D Vaccinia Virus protein VP39 90 209 IPR029063 -
Vimu4g01646 212 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 94 212 IPR002935 GO:0008171
Vimu4g01646 212 Pfam O-methyltransferase 112 207 IPR002935 GO:0008171
Vimu4g01646 212 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 208 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01646 73 207 Monolignol Biosynthesis Gene Families AT3G62000 76.812 5.80e-72 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01646 - - gmx:100776619 353.214