Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01626 ATGGTCGTTGATAAAAATGGCTTCGACCCTTTTCTCAAAGATGCTTTCGGGTCATCGATTGATCCACCATTCGTCGTTCCTCACTCAGCAGCCACAGTTTCTCTCTTCCTTATTCAGTGTAAGTTAGGTGATATGCTTTGGTGGCAATTTGCCATGGCATATGCTTCATTCGACTTCAATTTTGTAGTGTTTGGTGTTTTAAAACGGCTGTTTTGTATACAAACTGTCCCGGTCCCAGTTTCTACATCCCAAAACAGCAAAACAACTGGTTGGGTTCCTTGTATGGCTTCTTCTTCAGTTGGTAGAAGAGCTACATATTCTACAAAATCTGTATCAACAAATGAGCCAGTTGTTTCTGTTGATTGGCTTTATGATAACCTGAAGATGCCAGATATCAAGGTACTGGATGCTTCATGGTACATGCCAGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCGGGTGCCCTTTTCTTTGACGTGGATGGAATAGCAGATCGTACTACAAAGTTACCACACATGCTGCCATCTGAGGAAGCTTTTGCTGCTGCTGTTTCTGCCCTTGGCATAGAGAACAAAGATGACTTGGTTGTTTATGATGGAAAAGGGTTATTTAGTGCAGCCCGTGTTTGGTGGATGTTCCGAGTATTTGGGCATGACAGAGTTTGGGTGTTAGATGGTGGCCTGCCAAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCCATCGAGAAAGTATATAAGGGACAAACAGTTGGCCCACTCACATTCCAGACTAAATTTCGGCCACATCTTGTTTGGAACCTTGATCAGGTAAAGAAAAATATAGAGGACAAAACTCACCAACACATAGATGCTCGATCAAAGCCCAGGTTTGATGGAGCTGTTCCAGAGCCTCGAAAGGGAATCAGAAGTGGTCATGTACCTGGCAGCAAATGCATTCCTTTTGGCCAGCTGTTAGATAGTTCATATACATTGTTACCGGCAAATGAGCTGAAGAAGCGATTTGAACAAGAAGGCATCTCTCTCGATAGCCCTGCTGTTACTTCATGTGGAACAGGCGTAACTGCCTGCATTCTTGCATTGGGTCTGCATCGTCTTGAAAAGTTTGATGTTGCAGTTTATGATGGATCTTGGACTGAATGGGGAGCTCAAGCTGATACACCTGTTGACATTTCATAA 1239 0.4358 MVVDKNGFDPFLKDAFGSSIDPPFVVPHSAATVSLFLIQCKLGDMLWWQFAMAYASFDFNFVVFGVLKRLFCIQTVPVPVSTSQNSKTTGWVPCMASSSVGRRATYSTKSVSTNEPVVSVDWLYDNLKMPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTVGPLTFQTKFRPHLVWNLDQVKKNIEDKTHQHIDARSKPRFDGAVPEPRKGIRSGHVPGSKCIPFGQLLDSSYTLLPANELKKRFEQEGISLDSPAVTSCGTGVTACILALGLHRLEKFDVAVYDGSWTEWGAQADTPVDIS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01626 412 CDD TST_Repeat_2 287 403 - -
Vimu4g01626 412 ProSitePatterns Rhodanese signature 1. 152 163 IPR001307 GO:0004792
Vimu4g01626 412 Gene3D - 109 252 IPR036873 -
Vimu4g01626 412 CDD TST_Repeat_1 117 240 - -
Vimu4g01626 412 PANTHER THIOSULFATE SULFERTANSFERASE 112 411 IPR045078 GO:0016783
Vimu4g01626 412 ProSitePatterns Rhodanese C-terminal signature. 391 401 IPR001307 GO:0004792
Vimu4g01626 412 ProSiteProfiles Rhodanese domain profile. 296 410 IPR001763 -
Vimu4g01626 412 Pfam Rhodanese-like domain 119 238 IPR001763 -
Vimu4g01626 412 Pfam Rhodanese-like domain 289 403 IPR001763 -
Vimu4g01626 412 FunFam Sulfurtransferase 281 412 - -
Vimu4g01626 412 SMART rhod_4 286 407 IPR001763 -
Vimu4g01626 412 SMART rhod_4 118 242 IPR001763 -
Vimu4g01626 412 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 115 247 IPR036873 -
Vimu4g01626 412 FunFam Sulfurtransferase 110 252 - -
Vimu4g01626 412 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 281 410 IPR036873 -
Vimu4g01626 412 Gene3D - 282 410 IPR036873 -
Vimu4g01626 412 ProSiteProfiles Rhodanese domain profile. 128 245 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01626 95 410 Sulfurtransferasese or Rhodanese AT1G79230 79.114 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01626 K01011 - gmx:100798053 661.759