Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01611 CCATATGTTGATATGATTTTGGTAGATGGCATCACTCTCCTGTGCAATGATATTCAGGTGGATCCTCAAGATATAGTAATGGTAACTAGGAATGTTGAAAATTTTCAGTTAGTTCTTTCATGGCACATGAAGGCTGGCACCATGTGTGAGTTTTCGAAGAAGGAGTTTATTGAAGGATTACAATCTTTGGGAATTGATTCTCTGGAGAAGTTCCAAGAAAAGATACCATATATGCGCTCTGAGCTGAAAGATGAACAGAAATTCCGGGAGATCTATAACTTTGCGTTTGGATGGGCAAAAGAGAAGGGTCAAAAGTCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTATTTGCTGAGAAGCAGTGGCCACTGGTTGATCATTGGTGCCAGTTCTTGCAGGCTCGGCATAACAAAGCAATATCTAGGGACACGTGGTCTCAGCTTTTGGAGTTTGCGAAGACTGTTGGTTCAAATTTATCTGATTATGATGCTGAAGGTGCCTGGCCATATCTAATTGATGAATTTGTGGAATATCTGAATGAGAATGGAGTCATCCAAAATGGTCTCATCAATGATTCTAGTCTAAAACGATGA 603 0.3997 PYVDMILVDGITLLCNDIQVDPQDIVMVTRNVENFQLVLSWHMKAGTMCEFSKKEFIEGLQSLGIDSLEKFQEKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWCQFLQARHNKAISRDTWSQLLEFAKTVGSNLSDYDAEGAWPYLIDEFVEYLNENGVIQNGLINDSSLKR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01611 200 ProSiteProfiles DCUN1 domain profile. 1 183 IPR005176 -
Vimu4g01611 200 Gene3D Cullin, PONY binding domain 84 191 IPR042460 -
Vimu4g01611 200 Pfam Cullin binding 71 181 IPR005176 -
Vimu4g01611 200 Gene3D - 2 83 - -
Vimu4g01611 200 FunFam Defective in cullin neddylation protein 84 189 - -
Vimu4g01611 200 PANTHER RP42 RELATED 4 186 IPR014764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01611 Vimu-Chr4 17273901 17283278 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01611 K17822 - gmx:100795410 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01611 4 17273901 17283278 Vimu4g01611 4 17273901 17283278 ECH