Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01607 ATGATACTTTTCAACTCAAACTTGTTCTTACTTTCATATGCTTTTCTCTTGCCAACTTTGGTATTAGGAGATTGCACATGTGAGAGAGATGAAGCTAAAAGGAGTGACTCAACTCAAGTTCTTCACTACAAACTTGGCTCAATTGCTTCTGTGCTTGTTGCTGGAGCTCTTGGGGTCAGTCTTCCATTGCTCAGCAAGAGAATCCCTGCTCTTAATCCCAAGAATGATATATTCTTCATGGTTAAGGCCTTTGCTGCAGGGGTCATTCTTGCAACTGGGTTTGTCCACATACTTCCTGATGCATATGAAAGCTTGACTTCACCTTGCTTAAAGGAAAATCCATGGGGAAAGTTTCCCTTCACTGGCTTTGTTGCCATGATCTCTTCAATTGGGACCTTAATGCTCGACTCATTTGCCACAGCCTTCTACCACAGACAACATTTTAACCCCTCAAAGCAGGTTCCTGCTGATGAAGAAATTCCAGATGAACATGCTGGTCACATACATGTTCACACTCATGCCACACATGGCCATGCTCATGGAGCACCTCTCTCCTCTCATGATTCAGAAACATCTGAAGTAATTAGGCAGCGCATCATATCACAAGTGTTGGAAATAGGAATTGTGGTCCATTCGGTGATAATTGGATTATCATTGGGAACTGCAGGGAGCATTGATACCGTAAAACCTCTTCTGGTGGCCTTGTCTTTCCATCAATTTTTTGAGGGTATGGGTCTCGGTGGTTGCATATCTCAGGCAAAGTTTGAATCAAAGTCTACAGCAATAATGGCAACATTTTTCTCCCTAACAACCCCTATTGGTATAGCAATTGGAATGGGAGTGTCAAGTGCTTATAAAGAGAATAGTCCAACTGCTTTAAGTGTTGAAGGAGTCTTCAATTCTGCTTCTGCTGGGATTTTGATTTACATGGCACTGGTTGATCTTTTAGCAGCAGATTTTATGAACCCAAGATTGCAGAAAAATTTGAAGCTTCAATTAGGGGCAAATATATCCCTTCTTTTAGGCTCAGGCTGCATGTCTCTATTGGCCAAATGGGCTTAA 1062 0.42 MILFNSNLFLLSYAFLLPTLVLGDCTCERDEAKRSDSTQVLHYKLGSIASVLVAGALGVSLPLLSKRIPALNPKNDIFFMVKAFAAGVILATGFVHILPDAYESLTSPCLKENPWGKFPFTGFVAMISSIGTLMLDSFATAFYHRQHFNPSKQVPADEEIPDEHAGHIHVHTHATHGHAHGAPLSSHDSETSEVIRQRIISQVLEIGIVVHSVIIGLSLGTAGSIDTVKPLLVALSFHQFFEGMGLGGCISQAKFESKSTAIMATFFSLTTPIGIAIGMGVSSAYKENSPTALSVEGVFNSASAGILIYMALVDLLAADFMNPRLQKNLKLQLGANISLLLGSGCMSLLAKWA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01607 353 Pfam ZIP Zinc transporter 42 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu4g01607 353 PANTHER ZINC/IRON TRANSPORTER 40 346 - -
Vimu4g01607 353 NCBIfam ZIP zinc/iron transport family 27 353 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01607 Vimu-Chr4 17209766 17211468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01607 24 353 Inorganic Solute Cotransporters AT3G12750 65.282 2.66e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01607 K14709 - gmx:100805124 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01607 4 17209766 17211468 Vimu4g01607 4 17209766 17211468 ECH