Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01593 ATGAGAATTTTTTTTACTTTTAGATATGTTAAAAGCCGAAGTGATGAGCAATTGAGGGATCGTAATAAAGAGAACTCCACGAAAGCGTGTAAGCCTGAAGATACAGCCAATGGAAAGGCAATTGTACCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGACACTTACAGTTTCTCCCGGGACAACAGGAATTTGAAAGTGAACAAGGAAGGCATCTCTTGGAAGAGTGATAGAGAGCACAAATTTGGAAAAGATGTTTTCCCTAAAAACTTCCAGAATGGTTCTATTAAAGGTGGTGCAATCCTCAATGAATCCATACCATTGAGTAAGCAGGAGGATCTTATTGTCTGGATGCGAACCGCTGCTTTGCCAACTTTTAGGAAGTTGTATGGAAGGATAGAAGAGGATCTGAATGAAGGTGATACCATAAATGTAATACTGCAAAATAACTATAACACATACAGTTTTAATGGTAAGAAAAAGCTTGTATTGTCAACTACTAGCTGGCTTGGTGGGAAGAATGACTTCCTGGGCATTGCCTATCTCACTGTCGGAGGATTGTGCTTCTTTTTGGCTCTGGCTTTTACCATTGTATATTTTGTCAAGCCAAGGTAA 615 0.3902 MRIFFTFRYVKSRSDEQLRDRNKENSTKACKPEDTANGKAIVPCGLIAWSLFNDTYSFSRDNRNLKVNKEGISWKSDREHKFGKDVFPKNFQNGSIKGGAILNESIPLSKQEDLIVWMRTAALPTFRKLYGRIEEDLNEGDTINVILQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALAFTIVYFVKPR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01593 204 PANTHER CELL CYCLE CONTROL PROTEIN 50 8 204 IPR005045 GO:0016020
Vimu4g01593 204 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 8 204 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01593 Vimu-Chr4 17123211 17124193 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01593 K26935 - gmx:100806200 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01593 4 17123211 17124193 Vimu4g01593 4 17123211 17124193 ECH
Vimu4g01593 4 17123211 17124193 Vimu5g00894 5 12151361 12154847 PCT