Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01541 ATGGATGCTGAAAAGGATTCTCCGACGCCGGCAACATCACCGCCCGTGATACACCCCGCGGTGGCACCGCTCTCCTTCCTTCTTGGCACTTGGAGGGGCCAAGGAGAAGGAGGCTTCCCCACTATACACTCCTTCTCCTATGGTGAAGAGCTTTTCTTCTCCCATTCCCCCAACAAGCCTGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCTATGCACGGTGAGAGTGGATACTGGCGTCCTAAACCTGATGGCACCATTGAAGTTGTGATTGCTCAAAGCAATGGTCTTGTGGAAGTTCAGAAAGGGACATACAGCTTTGAAGAGAATGTGATACAACTTCAGAGTGAAATGGTGGGGAATGCTTCTAAGGTTAAAGAGATACGAAGAAGTTTTAAGGTGGTTGATGGGGTTCTTTCTTATGAGGTTCAGATGGCTACCAACACAGTAACTCTTCAACCACACTTGAAAGCAACACTCAAGAAGCTCTGA 507 0.4852 MDAEKDSPTPATSPPVIHPAVAPLSFLLGTWRGQGEGGFPTIHSFSYGEELFFSHSPNKPVIGYTQKTWKLSSGEPMHGESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSFEENVIQLQSEMVGNASKVKEIRRSFKVVDGVLSYEVQMATNTVTLQPHLKATLKKL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01541 168 Pfam THAP4-like, heme-binding beta-barrel domain 21 167 IPR014878 -
Vimu4g01541 168 CDD lipocalin_heme-bd-THAP4-like 21 167 IPR014878 -
Vimu4g01541 168 SUPERFAMILY Lipocalins 17 167 IPR012674 -
Vimu4g01541 168 Gene3D - 15 168 IPR012674 -
Vimu4g01541 168 PANTHER THAP4 PROTEIN 7 168 IPR045165 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01541 - K23205 gmx:100306509 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01541 4 16283720 16288249 Vimu4g01541 4 16283720 16288249 ECH