Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01444 ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAGGCGTGCAACCTCTTCTGCCTTCCTGAGAACTATCAGATGAAGTATTACTTCTATCACATCCTCTCATGGCCTCAGCTTCTCTACGTCGCCGAAGACTACAACGGTCGCATCGTCGGCTACGTTCTCGCCAAGATGGAGGAGGAAACCACCGACTGCCACGGCCACATCACCTCCCTTGCCGTCCTCCGAACCCACCGCAAACTCGGTCTCGCCACCAAACTCATGACCGCCGCACAGAACGCCATGGAACAGGTGTTTGGTGCCGAGTACGTGTCCCTGCACGTGCGCAAGAGCAACCGCGCGGCCTTTAATTTGTACACCGAGACCTTGGGTTACAAGATTCATGATGTGGAGGCTAAGTATTATGCGGACGGAGAGGATGCTTATGACATGAGGAAGCAGCTCAAGGGGAAGCAGCTGCATCAGCAGCACCATCATCACCACCATCACCATCACCACCACCACCACCATCACGAACATGGAGGCATGTGTTGTTCCGGAGAGGTCAAGGGGAATGCCAAAGCCACCTGA 579 0.5509 MVCIRKATVKDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQLHQQHHHHHHHHHHHHHHHEHGGMCCSGEVKGNAKAT 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01444 192 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 151 IPR016181 -
Vimu4g01444 192 PANTHER N-TERMINAL ACETYLTRANSFERASE 1 177 IPR045047 GO:0004596|GO:0006474|GO:0031415
Vimu4g01444 192 FunFam N-alpha-acetyltransferase daf-31-like 2 180 - -
Vimu4g01444 192 CDD NAT_SF 43 110 - -
Vimu4g01444 192 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 152 IPR000182 GO:0016747
Vimu4g01444 192 MobiDBLite consensus disorder prediction 154 176 - -
Vimu4g01444 192 Pfam Acetyltransferase (GNAT) family 39 128 IPR000182 GO:0016747
Vimu4g01444 192 Gene3D - 2 185 - -
Vimu4g01444 192 MobiDBLite consensus disorder prediction 151 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01444 Vimu-Chr4 15134416 15135237 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu4g01444 Acetyltransf_1 7e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01444 K20791 - gmx:100810038 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01444 4 15134416 15135237 Vimu4g01444 4 15134416 15135237 ECH