Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01429 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAAATAATGTTGTATTTTTGAATCCAGAGTCATCTAGCAGTTTTCAGGCTTCAGCATCTGTGAACACAGTTCCTGAATTATGTAGGAGTAGCAGCAGAACATGCACTCACACTCACACTTGCAACCCCCCTGGCCCTGATGCTGCTCACACACACACATGCTATCACACTCACACCCAAATTTTTGCACCTGAAGATGATGACCACAAGGAGCACACCAACTCCAAACCAAAAAGGCCTTCTGGCAACCGAGAAGCTGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTTTGGTGAATCAGCAACTAGCGAGAAAACTACAAGGGCAGGCACTTCTTGAAGCAGAATTGGCAAGGTTGAGGAGCATTTTGGCACACCTAAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCCTTTCAGAAGCAGTGTAACTCTTACATTCTGAAAGAAGGGGATGCTGGTTTGCTTTCTACTGCAAGGACAATTGGCTTTCAGTGTCAGAACAAGTTGCCATGCTTTCATCCACATGCAGGATCATCATCCCAGGTCAACATTTGTGCATATGGTAAGTCCGTGAGTCCATGGGAAGGAAACTGCCAACCTGAAATTGTAGATTGTCATGTTGATGCAAATAACTTGACCAGTACTGAAGGACAAACTGTTGAGACAGTGGATAACTTCTTGTCATCTGCATCTCAAGAGTGA 780 0.4436 MDDGNAELSDKLSNNVVFLNPESSSSFQASASVNTVPELCRSSSRTCTHTHTCNPPGPDAAHTHTCYHTHTQIFAPEDDDHKEHTNSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLARKLQGQALLEAELARLRSILAHLKGKIDSELGAFPFQKQCNSYILKEGDAGLLSTARTIGFQCQNKLPCFHPHAGSSSQVNICAYGKSVSPWEGNCQPEIVDCHVDANNLTSTEGQTVETVDNFLSSASQE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01429 259 CDD bZIP 95 142 - -
Vimu4g01429 259 Gene3D - 76 152 - -
Vimu4g01429 259 SMART brlzneu 77 150 IPR004827 GO:0003700|GO:0006355
Vimu4g01429 259 Pfam Basic region leucine zipper 87 140 IPR004827 GO:0003700|GO:0006355
Vimu4g01429 259 MobiDBLite consensus disorder prediction 74 101 - -
Vimu4g01429 259 PANTHER CCAAT/ENHANCER BINDING PROTEIN 20 163 IPR031106 GO:0003700|GO:0006351
Vimu4g01429 259 SUPERFAMILY Leucine zipper domain 90 132 IPR046347 GO:0003700|GO:0006355
Vimu4g01429 259 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01429 Vimu-Chr4 14944852 14945631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01429 44 183 bZIP Transcription Factor Family AT3G51960 53.472 1.12e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu4g01429 bZIP_2 7.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01429 K25785 - gmx:100527780 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01429 4 14944852 14945631 Vimu4g01429 4 14944852 14945631 ECH