Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01348 ATGAAGAATTGCGATGAATGGAAACCTTTCCTAGCAATGATAGCTATTGATTTTTCTTTAACCATGGTGAACATCCTTCTCAAGCAAGTCCTCCAAAAAGGAATGAACCATTTGGCTTTTGTCACATATCGTCTGTCAGTTTCTACTATATTTTTAGCCCCCATCAGCTACTTTAAGGAAAGAAATAGAAGACCACGGCTCACATTTCAAATTTTATGCTACCTTTTCTTCAGTGCCATTATTGGGTTAGGCATCCGTCACACAATACTTCTTCCTTTTGGGATCCAATATACCTCAGCCACATTTGCCTGTGCATTTGTCAATATGGTGCCGGTGATAACCTTCATCATGGCATTGCCATTTGGGCTAGAAACAGTGAATATTAAATGCACGGGTGGGAAAGCGAAGATTCTGGGCACATTTGTGTGTGTAGGAGGGGCATTAGTGTTGACACTTTACAGAGGAAAACCCTTGTTTGATGTGTCTCACTATAAAGCAACGGTTCCTCCGGTAGCGATGAGATCTGCAATGGACGAAGGTGGTTCCAGTGGTAGAACAGCACAGAAATGGAGCATTGGTGTGATAGCTTTGATGATGGGAACCCTATTTTGGTCTTTTTGGTTTATTCTACAGTCAAAGATAGGGAAGAAGTATCCTTGCCAGTATTCTAGCACAGCAATCATGACGTTCTTTGGAGCCATGCAAGCAGCTATTCTTGGTTTGTCCACAGGCACCAACTTCTCCTCCTGGATTCTCAAGGATAAGATGCAAATAATCACTGTTCTTTATTCTAGGTTGACATTGAACGGTTTTGTTTCCGTCATTGAAGGCTTTCATTTCCGTTCCGCCATAGAAGTATTGGAAGTATTGGGAGGAAGTGCCGATAAGGGCCAACATTGTCATCTTTTCTCCAAAGGGGGAGTTTTTTGGCTGTCGGCGTTGGTACTTGGCCAAAGAAATCGTGTTTCTACACTGAGGAAGTCCGCTATTGAAGTCGTTTTTCTGGAAAGTATGCTTAGAGGTGTAACTTCATCTCCGTCTACGGTTGAAGTATTTGAGGTTGACATCGATAGGCTTTTGTTGCCGTGGTTGAAGTATCTTCATCTTCATCTTCGTCCGGCATTGAAGTATTGGAGGAGGAAGTGTCGATTAGGGCCGGTCGGCCATCATTGA 1173 0.4297 MKNCDEWKPFLAMIAIDFSLTMVNILLKQVLQKGMNHLAFVTYRLSVSTIFLAPISYFKERNRRPRLTFQILCYLFFSAIIGLGIRHTILLPFGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCTGGKAKILGTFVCVGGALVLTLYRGKPLFDVSHYKATVPPVAMRSAMDEGGSSGRTAQKWSIGVIALMMGTLFWSFWFILQSKIGKKYPCQYSSTAIMTFFGAMQAAILGLSTGTNFSSWILKDKMQIITVLYSRLTLNGFVSVIEGFHFRSAIEVLEVLGGSADKGQHCHLFSKGGVFWLSALVLGQRNRVSTLRKSAIEVVFLESMLRGVTSSPSTVEVFEVDIDRLLLPWLKYLHLHLRPALKYWRRKCRLGPVGHH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01348 390 PANTHER WAT1-RELATED PROTEIN 8 274 IPR030184 GO:0016020|GO:0022857
Vimu4g01348 390 Pfam EamA-like transporter family 24 151 IPR000620 GO:0016020
Vimu4g01348 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01348 Vimu-Chr4 13716657 13718950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01348 7 264 Nodulin-like Gene Family AT3G30340 46.124 6.20e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01348 - - gmx:100791663 434.491