Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01291 ATGGAGAACTGTGCAGAGAATATTACCATGAATGGTGAAAGCAATGACGAATTTATTAACGTAGTTGATAGTGTGTCTGACTTGGTTCCTATGGTCAACATGTGTTTCGACAGTATGGAAGATGCAAAGAAATATTATTCAGATTATGGAAAAAGAATTGGATTTGGTGTTCGTACAAGAACTTCAAAAAAGGACAACAATAACGAATTGTATTATTTGAGATTGGTATGTTCAAGGGAAGGTAGATATGTCTCTAACATTCGTCCTGAAGTAAAAACCCTTCCTAGTCAAACAAAGCAATGCCCTGCGGGGATAACATTTGCCAAAAAAGATGACAAATGGGTTGTGAGGACTGTTATGGTAGATCACAGTCATGATCTTTGTCCACAAACTTCCAATCTCATTCGTGCCAACAGAAAATTGGACATGCATGCAAAGCACACCTTG 447 0.3781 MENCAENITMNGESNDEFINVVDSVSDLVPMVNMCFDSMEDAKKYYSDYGKRIGFGVRTRTSKKDNNNELYYLRLVCSREGRYVSNIRPEVKTLPSQTKQCPAGITFAKKDDKWVVRTVMVDHSHDLCPQTSNLIRANRKLDMHAKHTL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01291 149 Pfam FAR1 DNA-binding domain 44 128 IPR004330 -
Vimu4g01291 149 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01291 Vimu-Chr4 12338016 12338899 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vimu4g01291 FAR1 1.4e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01291 - - vra:106759276 242.662