Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01243 ATGAGCAAGTTAGGTGTGGGTTCGGACTTTCACAACTTCAAGTATATGATCGAGCCCAAATTGGAGGACCGTATATGCGTCAACGATGGACAATGGACTACGGCTTTGCAAAGGAGAAAATCTGATACCCGTTGGTTGTATTCGATTAGGTCATTGGAGGCACTAGAAAAAATTTTTAAGCAGTTTCTTGGAGATTTTATGAGCGCATGTCATGTTCTTCTATGCAAAAGGTCATTGGAGGCACTAGACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATTAGTGCACGTCATATTAGGTCATTGGAGGCACTAGACAAACCTTTTGAGCAGTTTCTTGGAGATTTTATGAGCGCACGTAATGTTCTTCTATGCAAAAGGTATCTTGTAGAAATTTATATCGTGTACACAGTTGTATCCACTGTCCGAGTATTCTTGCTAGATGCAAGTGATAGACTAAGAGTGATAAGTCATTGGAAGCACTACTTTGAGCAGTTTGTTGGAGATTTTATGAGCTCACTTCATGTTCTTCTATCCAAAAGGTCATTGGAGGCACTGGAAAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGCGCACGTCATGTTCTTCTATGCAAAAGATTAGGTCATTGGAAGCACTACTTTGAGCAGTTTGTGGGAGATTTTATGAGTGCACTTCATGTTCTTCTATCCAAAAGATTAGGTCATTGGAAGCACTACTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTTATGTTCTTCTATCCAAAAGGTATTGCTCGTGAAATTAGGTCATTGGAGGCACTAGACAAACTTTTTGAACGGTTTCTTGGAGATTTTATGAGCGCACGTCATGTTCTTCTATGCAAAAGATTAGGTCATTGGAAGCACTACTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTCATGTTCTTCTATCCAAAAGGTATTGCTCGTGAAATTAGGTCATTGGAGGCACTAGACAAACTTTTTGAACGGTTTCTTGGAGATTTTATGAGCGCACGTCATGTTCTTCTATGCAAAAGATTAGGTCATTGGAAGCACTACTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTCATGTTCTTCTATCCAAAAGGTATTGCTCGTGAAGCAATAATTTTCTTGATTAGGTCATTGGAGGCACTAGACAAACTTTTTGAGCAGTTTCTTGGAGATTTTATGAGCGCACGTCGTGTTCTTCTATTCAAAAGATTAGGTCATTGGAAGCACTACTTTGAGCAGTTTGTTGGAGATTTTATGAGCGCACTTCATGTTCTTCTATCCAAAAGATTAGGTCATTGGAATTACTACTTTGAGCAGTTTGTTGGAGATTTTATGAGCACACTTCATGTTCTTCTATCCAAAAGGTACTGCTCATGA 1416 0.3905 MSKLGVGSDFHNFKYMIEPKLEDRICVNDGQWTTALQRRKSDTRWLYSIRSLEALEKIFKQFLGDFMSACHVLLCKRSLEALDKLFEQFLGDFISARHIRSLEALDKPFEQFLGDFMSARNVLLCKRYLVEIYIVYTVVSTVRVFLLDASDRLRVISHWKHYFEQFVGDFMSSLHVLLSKRSLEALEKLFEQFLGDFMSARHVLLCKRLGHWKHYFEQFVGDFMSALHVLLSKRLGHWKHYFEQFVGDFMSALMFFYPKGIAREIRSLEALDKLFERFLGDFMSARHVLLCKRLGHWKHYFEQFVGDFMSALMFFYPKGIAREIRSLEALDKLFERFLGDFMSARHVLLCKRLGHWKHYFEQFVGDFMSALMFFYPKGIAREAIIFLIRSLEALDKLFEQFLGDFMSARRVLLFKRLGHWKHYFEQFVGDFMSALHVLLSKRLGHWNYYFEQFVGDFMSTLHVLLSKRYCS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01243 471 Gene3D RNA Cap, Translation Initiation Factor Eif4e 1 78 IPR023398 -
Vimu4g01243 471 SUPERFAMILY eIF4e-like 2 49 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01243 Vimu-Chr4 11551803 11571741 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01243 2 52 Eukaryotic Initiation Factors Gene Family AT4G18040 52.941 1.07e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01243 K03259 - jre:108987487 74.3294