Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01212 ATGGAAGAAACCACCTATTCAATAGCCTCCTCCTCCTACCCAACAAAAAAAGCAATAATAAAATTACTAACAATCCATCTCTTCCTTTTCTTGAGCCTTCATGTCTCCGATGTCCGAGCACAGAAAACACCATCGTCATCTTCGCTCGAACTCGAAAGCTGCGATGGAGTTTTTATCTCGTACGCCCTTGTGTCGCGGGAGAAGGAGTACCCACACGTGAATAACGCATCGAAGCAGGCGTGGGCGTTCAAGGCGGAAGCCACGCTAACGAACGTGGGAGATGAGGAGGTGCAGGGGTGGAAGATGTTTGTGGGGTTCCAGCACCGCGAGATTCTGGTCTCCGCAGACGGCGCCATTCTCATCGACGCCGGCGACTTTCCTGCGGAGGTGGGAAATGGGACGACGATGGTGGGGTCCACCGTGGCGGACTTGAAGACTGCCATTGGCACCGCCGGGGATCTGAACCAGATGAGTGCAAAGATCGATATTGTTGGGACGCAGTTTGGTTTGGGTGTTGGAGCTACCCCGATGCCCAAAACCATTACTCTTCAGAATGATGGATTCAAATGCCCTGCACCTACTCGAAAAGGTAATATACGTATCCGTGCTTTTTTCTCTTCTCTCACGTCGTAG 633 0.5166 MEETTYSIASSSYPTKKAIIKLLTIHLFLFLSLHVSDVRAQKTPSSSSLELESCDGVFISYALVSREKEYPHVNNASKQAWAFKAEATLTNVGDEEVQGWKMFVGFQHREILVSADGAILIDAGDFPAEVGNGTTMVGSTVADLKTAIGTAGDLNQMSAKIDIVGTQFGLGVGATPMPKTITLQNDGFKCPAPTRKGNIRIRAFFSSLTS 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01212 210 PANTHER COBRA-LIKE PROTEIN 7 19 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01212 Vimu-Chr4 10997318 10997950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01212 50 197 COBRA Gene Family AT3G20580 56.081 4.57e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01212 - - gmx:100789175 269.24